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TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines

Abstract : TrackMate is an automated tracking software used to analyze bioimages and is distributed as a Fiji plugin. Here, we introduce a new version of TrackMate. TrackMate 7 is built to address the broad spectrum of modern challenges researchers face by integrating state-of-the-art segmentation algorithms into tracking pipelines. We illustrate qualitatively and quantitatively that these new capabilities function effectively across a wide range of bio-imaging experiments.
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https://hal-pasteur.archives-ouvertes.fr/pasteur-03691516
Contributor : Jean-Yves Tinevez Connect in order to contact the contributor
Submitted on : Monday, June 20, 2022 - 10:08:43 AM
Last modification on : Friday, August 5, 2022 - 12:03:12 PM
Long-term archiving on: : Thursday, September 22, 2022 - 10:52:55 AM

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Distributed under a Creative Commons Attribution - NonCommercial 4.0 International License

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Dmitry Ershov, Minh-Son Phan, Joanna Pylvänäinen, Stéphane Rigaud, Laure Le Blanc, et al.. TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines. Nature Methods, 2022, ⟨10.1038/s41592-022-01507-1⟩. ⟨pasteur-03691516⟩

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