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Bioconda: sustainable and comprehensive software distribution for the life sciences

Bjorn Grüning 1 Ryan Dale 2 Andreas Sjödin 3, 4 Brad Chapman 5 Jillian Rowe 6 Christopher Tomkins-Tinch 7 Renan Valieris 8 Johannes Köster 9 Bioconda Team 
1 Albert-Ludwigs-Universität Freiburg
2 NIH - National Institutes of Health [Bethesda]
3 FOI - Swedish Defence Research Agency [Stockholm]
4 Umeå University
5 Harvard T.H. Chan School of Public Health
6 New York University [Abu Dhabi]
7 Harvard University [Cambridge]
8 Hospital Camargo Sao Paulo
9 University of Duisburg-Essen
Abstract : To the Editor: Bioinformatics software comes in a variety of programming languages and requires diverse installation methods. This heterogeneity makes management of a software stack complicated, error-prone, and inordinately time-consuming.
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Submitted on : Monday, August 31, 2020 - 3:36:44 PM
Last modification on : Wednesday, June 23, 2021 - 3:41:10 AM

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Bjorn Grüning, Ryan Dale, Andreas Sjödin, Brad Chapman, Jillian Rowe, et al.. Bioconda: sustainable and comprehensive software distribution for the life sciences. Nature Methods, Nature Publishing Group, 2018, 15 (7), pp.475-476. ⟨10.1038/s41592-018-0046-7⟩. ⟨pasteur-02926292⟩

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