A community resource for paired genomic and metabolomic data mining
Michelle A. Schorn
(1)
,
Stefan Verhoeven
(2)
,
Lars Ridder
(2)
,
Florian Huber
(2)
,
Deepa D. Acharya
(3)
,
Alexander A. Aksenov
(4)
,
Gajender Aleti
(4)
,
Jamshid Amiri Moghaddam
(5)
,
Allegra T. Aron
(4)
,
Saefuddin Aziz
(6, 7)
,
Anelize Bauermeister
(4, 8)
,
Katherine D. Bauman
(4)
,
Martin Baunach
(9)
,
Christine Beemelmanns
(5)
,
J. Michael Beman
(10)
,
María Victoria Berlanga-Clavero
(11)
,
Alex A. Blacutt
(12)
,
Helge B. Bode
(13, 14, 15)
,
Anne Boullie
(16)
,
Asker Brejnrod
(4)
,
Tim S. Bugni
(3)
,
Alexandra Calteau
(17)
,
Liu Cao
(18)
,
Víctor J. Carrión
(19, 20)
,
Raquel Castelo-Branco
(21, 22)
,
Shaurya Chanana
(3)
,
Alexander B. Chase
(4)
,
Marc G. Chevrette
(3)
,
Leticia V. Costa-Lotufo
(8)
,
Jason M. Crawford
(23, 24)
,
Cameron R. Currie
(3)
,
Bart Cuypers
(25, 26)
,
Tam Dang
(27)
,
Tristan de Rond
(4)
,
Alyssa M. Demko
(4)
,
Elke Dittmann
(9)
,
Chao Du
(19)
,
Christopher Drozd
(12)
,
Jean-Claude Dujardin
(26)
,
Rachel J. Dutton
(4)
,
Anna Edlund
(28, 4)
,
David P. Fewer
(22)
,
Kyo Bin Kang
,
Chung Sub Kim
,
Ki Hyun Kim
,
Seoung Rak Lee
,
Johannes Sørensen
,
Neha Garg
,
Julia M Gauglitz
,
Emily C Gentry
,
Lena Gerwick
,
Evgenia Glukhov
,
Harald Gross
,
Muriel Gugger
(16)
,
Dulce G Guillén Matus
,
Eric J N Helfrich
,
Benjamin-Florian Hempel
,
Jae-Seoun Hur
,
Marianna Iorio
,
Paul R Jensen
,
Kyo Bin Kang
,
Leonard Kaysser
,
Neil L Kelleher
,
Chung Sub Kim
,
Ki Hyun Kim
,
Irina Koester
,
Gabriele M König
,
Tiago Leao
,
Seoung Rak Lee
,
Yi-Yuan Lee
,
Xuanji Li
,
Jessica C Little
,
Katherine N Maloney
,
Daniel Männle
,
Christian Martin H.
,
Andrew C Mcavoy
,
Willam W Metcalf
,
Hosein Mohimani
,
Carlos Molina-Santiago
,
Bradley S Moore
,
Michael W Mullowney
,
Mitchell Muskat
,
Louis-Félix Nothias
,
Ellis O’neill
,
Elizabeth Parkinson
,
Daniel Petras
,
Jörn Piel
,
Emily Pierce
,
Karine Pires
,
Raphael Reher
,
Diego Romero
,
M. Caroline Caroline Roper
,
Michael Rust
,
Hamada Saad
,
Carmen Saenz
,
Laura M Sanchez
,
Christian Martin
(29)
,
Søren Johannes Sørensen
,
Margherita Sosio
,
Roderich D Süssmuth
,
Douglas Sweeney
,
Kapil Tahlan
,
Regan J Thomson
,
Nicholas J Tobias
,
Amaro E Trindade-Silva
,
Gilles P van Wezel
,
Mingxun Wang
,
Kelly C Weldon
,
Fan Zhang
,
Nadine Ziemert
,
Katherine R Duncan
,
Max Crüsemann
,
Simon Rogers
,
Pieter C Dorrestein
(4)
,
Marnix H Medema
(1)
,
Justin J J van Der Hooft
(1)
1
WUR -
Wageningen University and Research [Wageningen]
2 Netherlands eScience Center
3 University of Wisconsin-Madison
4 UC San Diego - University of California [San Diego]
5 Leibniz Institute for Natural Product Research and Infection Biology (Hans Knoell Institute)
6 Eberhard Karls Universität Tübingen = Eberhard Karls University of Tuebingen
7 Jenderal Soedirman University [Purwokerto, Indonesia]
8 USP - Universidade de São Paulo = University of São Paulo
9 University of Potsdam = Universität Potsdam
10 UC Merced - University of California [Merced]
11 Universidad de Málaga [Málaga] = University of Málaga [Málaga]
12 UC Riverside - University of California [Riverside]
13 Goethe-University Frankfurt am Main
14 Senckenberg – Leibniz Institution for Biodiversity and Earth System Research - Senckenberg Gesellschaft für Naturforschung
15 Max Planck Institute for Terrestrial Microbiology
16 Collection des Cyanobactéries
17 GENOSCOPE - Genoscope - Centre national de séquençage [Evry]
18 CMU - Carnegie Mellon University [Pittsburgh]
19 Leiden University
20 NIOO-KNAW - Netherlands Institute of Ecology
21 Universidade do Porto = University of Porto
22 Helsingin yliopisto = Helsingfors universitet = University of Helsinki
23 Yale University [New Haven]
24 YSM - Yale School of Medicine [New Haven, Connecticut]
25 UA - University of Antwerp
26 ITM - Institute of Tropical Medicine [Antwerp]
27 TU - Technische Universität Berlin
28 JCVI - J. Craig Venter Institute [La Jolla, USA]
29 Instituto de Investigaciones Científicas y Servicios de Alta Tecnología [Panama]
2 Netherlands eScience Center
3 University of Wisconsin-Madison
4 UC San Diego - University of California [San Diego]
5 Leibniz Institute for Natural Product Research and Infection Biology (Hans Knoell Institute)
6 Eberhard Karls Universität Tübingen = Eberhard Karls University of Tuebingen
7 Jenderal Soedirman University [Purwokerto, Indonesia]
8 USP - Universidade de São Paulo = University of São Paulo
9 University of Potsdam = Universität Potsdam
10 UC Merced - University of California [Merced]
11 Universidad de Málaga [Málaga] = University of Málaga [Málaga]
12 UC Riverside - University of California [Riverside]
13 Goethe-University Frankfurt am Main
14 Senckenberg – Leibniz Institution for Biodiversity and Earth System Research - Senckenberg Gesellschaft für Naturforschung
15 Max Planck Institute for Terrestrial Microbiology
16 Collection des Cyanobactéries
17 GENOSCOPE - Genoscope - Centre national de séquençage [Evry]
18 CMU - Carnegie Mellon University [Pittsburgh]
19 Leiden University
20 NIOO-KNAW - Netherlands Institute of Ecology
21 Universidade do Porto = University of Porto
22 Helsingin yliopisto = Helsingfors universitet = University of Helsinki
23 Yale University [New Haven]
24 YSM - Yale School of Medicine [New Haven, Connecticut]
25 UA - University of Antwerp
26 ITM - Institute of Tropical Medicine [Antwerp]
27 TU - Technische Universität Berlin
28 JCVI - J. Craig Venter Institute [La Jolla, USA]
29 Instituto de Investigaciones Científicas y Servicios de Alta Tecnología [Panama]
Kyo Bin Kang
- Function : Author
Chung Sub Kim
- Function : Author
Ki Hyun Kim
- Function : Author
Seoung Rak Lee
- Function : Author
Johannes Sørensen
- Function : Author
Neha Garg
- Function : Author
Julia M Gauglitz
- Function : Author
Emily C Gentry
- Function : Author
Lena Gerwick
- Function : Author
Evgenia Glukhov
- Function : Author
Harald Gross
- Function : Author
- PersonId : 780298
- ORCID : 0000-0002-0731-821X
Dulce G Guillén Matus
- Function : Author
Eric J N Helfrich
- Function : Author
Benjamin-Florian Hempel
- Function : Author
Jae-Seoun Hur
- Function : Author
Marianna Iorio
- Function : Author
Paul R Jensen
- Function : Author
Kyo Bin Kang
- Function : Author
Leonard Kaysser
- Function : Author
Neil L Kelleher
- Function : Author
Chung Sub Kim
- Function : Author
Ki Hyun Kim
- Function : Author
Irina Koester
- Function : Author
Gabriele M König
- Function : Author
Tiago Leao
- Function : Author
Seoung Rak Lee
- Function : Author
Yi-Yuan Lee
- Function : Author
Xuanji Li
- Function : Author
Jessica C Little
- Function : Author
Katherine N Maloney
- Function : Author
Daniel Männle
- Function : Author
Christian Martin H.
- Function : Author
Andrew C Mcavoy
- Function : Author
Willam W Metcalf
- Function : Author
Hosein Mohimani
- Function : Author
Carlos Molina-Santiago
- Function : Author
Bradley S Moore
- Function : Author
Michael W Mullowney
- Function : Author
Mitchell Muskat
- Function : Author
Louis-Félix Nothias
- Function : Author
Ellis O’neill
- Function : Author
Elizabeth Parkinson
- Function : Author
Daniel Petras
- Function : Author
Jörn Piel
- Function : Author
Emily Pierce
- Function : Author
Karine Pires
- Function : Author
Raphael Reher
- Function : Author
Diego Romero
- Function : Author
M. Caroline Caroline Roper
- Function : Author
Michael Rust
- Function : Author
- PersonId : 793403
- ORCID : 0000-0001-6648-2434
Hamada Saad
- Function : Author
Carmen Saenz
- Function : Author
Laura M Sanchez
- Function : Author
Søren Johannes Sørensen
- Function : Author
Margherita Sosio
- Function : Author
Roderich D Süssmuth
- Function : Author
Douglas Sweeney
- Function : Author
Kapil Tahlan
- Function : Author
Regan J Thomson
- Function : Author
Nicholas J Tobias
- Function : Author
Amaro E Trindade-Silva
- Function : Author
Gilles P van Wezel
- Function : Author
Mingxun Wang
- Function : Author
Kelly C Weldon
- Function : Author
Fan Zhang
- Function : Author
- PersonId : 760913
- ORCID : 0000-0001-9017-5864
Nadine Ziemert
- Function : Author
Katherine R Duncan
- Function : Author
Max Crüsemann
- Function : Author
Simon Rogers
- Function : Author
Marnix H Medema
- Function : Author
- PersonId : 1092091
Justin J J van Der Hooft
- Function : Author
- PersonId : 1092092
Abstract
Genomics and metabolomics are widely used to explore specialized metabolite diversity. The Paired Omics Data Platform is a community initiative to systematically document links between metabolome and (meta)genome data, aiding identification of natural product biosynthetic origins and metabolite structures.
Domains
Life Sciences [q-bio]
Origin : Publication funded by an institution