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Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable

Carla Mavian 1, * Sergei Kosakovsky Pond 2 Simone Marini 1 Brittany Rife Magalis 1 Anne-Mieke Vandamme 3, 4 Simon Dellicour 3, 5 Samuel V. Scarpino 6 Charlotte Houldcroft 7 Christian Julián Villabona-Arenas 8 Taylor K. Paisie 1 Nídia S. Trovão 9 Christina Boucher 1 Yun Zhang 10 Richard H. Scheuermann 10, 11 Olivier Gascuel 12 Tommy Tsan-Yuk Lam 13 Marc A. Suchard 14 Ana Abecasis 4 Eduan Wilkinson 15 Tulio de Oliveira 15 Ana I. Bento 16 Heiko A. Schmidt 17 Darren Martin 18 James Hadfield 19 Nuno Faria 20 Nathan D. Grubaugh 21 Richard A. Neher 22 Guy Baele 3 Philippe Lemey 3 Tanja Stadler 23 Jan Albert 24 Keith A. Crandall 25 Thomas Leitner 26 Alexandros Stamatakis 27, 28 Mattia Prosperi 1, * Marco Salemi 1, * 
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https://hal-pasteur.archives-ouvertes.fr/pasteur-03037656
Contributor : Anna Zhukova Connect in order to contact the contributor
Submitted on : Thursday, December 3, 2020 - 10:58:50 AM
Last modification on : Wednesday, November 30, 2022 - 11:22:07 AM
Long-term archiving on: : Thursday, March 4, 2021 - 6:47:07 PM

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Carla Mavian, Sergei Kosakovsky Pond, Simone Marini, Brittany Rife Magalis, Anne-Mieke Vandamme, et al.. Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable. Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (23), pp.12522-12523. ⟨10.1073/pnas.2007295117⟩. ⟨pasteur-03037656⟩

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