Mass Spectrometry for Rapid Characterization of Microorganisms, Annual Review of Analytical Chemistry, vol.1, issue.1, pp.71-93, 2008. ,
A Revolution in the Identification of Pathogens in Clinical Laboratories, Clinical Infectious Diseases, vol.49, issue.4, pp.552-553, 2009. ,
MALDI-TOF mass spectrometry: an emerging technology for microbial identification and diagnosis, Frontiers in Microbiology, vol.6, p.791, 2015. ,
Can MALDI-TOF Mass Spectrometry Reasonably Type Bacteria?, Trends in Microbiology, vol.25, issue.6, pp.447-455, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01505999
Insufficient discriminatory power of MALDI-TOF mass spectrometry for typing of Enterococcus faecium and Staphylococcus aureus isolates, Journal of Microbiological Methods, vol.100, pp.58-69, 2014. ,
Rapid Bacterial Identification, Resistance, Virulence and Type Profiling using Selected Reaction Monitoring Mass Spectrometry, Scientific Reports, vol.5, issue.1, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01229864
Rapid Bacterial Identification, Resistance, Virulence and Type Profiling using Selected Reaction Monitoring Mass Spectrometry ,
URL : https://hal.archives-ouvertes.fr/hal-01229864
Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry, Frontiers in Microbiology, vol.10, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02626419
Interpretation of Shotgun Proteomic Data, Molecular & Cellular Proteomics, vol.4, issue.10, pp.1419-1440, 2005. ,
Top Down Proteomics, Analytical Chemistry, vol.85, issue.13, pp.6151-6151, 2013. ,
Top Down proteomics: Facts and perspectives, Biochemical and Biophysical Research Communications, vol.445, issue.4, pp.683-693, 2014. ,
Top-Down Proteomics: Ready for Prime Time?, Analytical Chemistry, vol.90, issue.1, pp.110-127, 2017. ,
Proteoform: a single term describing protein complexity, Nature Methods, vol.10, issue.3, pp.186-187, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-02086222
ProForma: A Standard Proteoform Notation, Journal of Proteome Research, vol.17, issue.3, pp.1321-1325, 2018. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02331425
Complete posttranslational modification mapping of pathogenicNeisseria meningitidispilins requires top-down mass spectrometry, PROTEOMICS, vol.14, issue.10, pp.1141-1151, 2014. ,
Neisseria meningitidis Type IV Pili Composed of Sequence Invariable Pilins Are Masked by Multisite Glycosylation, PLOS Pathogens, vol.11, issue.9, p.e1005162, 2015. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01300944
Top-Down Proteomics in the Study of Microbial Pathogenicity, MALDI-TOF and Tandem MS for Clinical Microbiology, pp.493-504, 2017. ,
Top-down proteomics reveals a unique protein S-thiolation switch in Salmonella Typhimurium in response to infection-like conditions, Proc. Natl. Acad. Sci. U.S.A, vol.86, issue.18, pp.10153-10158, 2013. ,
Automated Proteomics ofE. colivia Top-Down Electron-Transfer Dissociation Mass Spectrometry, Analytical Chemistry, vol.80, issue.5, pp.1459-1467, 2008. ,
Using size exclusion chromatography-RPLC and RPLC-CIEF as two-dimensional separation strategies for protein profiling, ELECTROPHORESIS, vol.27, issue.13, pp.2722-2733, 2006. ,
Autopilot: An Online Data Acquisition Control System for the Enhanced High-Throughput Characterization of Intact Proteins, Analytical Chemistry, vol.86, issue.3, pp.1485-1492, 2014. ,
Top-Down Characterization of the Post-Translationally Modified Intact Periplasmic Proteome from the BacteriumNovosphingobium aromaticivorans, International Journal of Proteomics, vol.2013, pp.1-10, 2013. ,
A top-down proteomics approach for differentiating thermal resistant strains ofEnterobacter sakazakii, PROTEOMICS, vol.5, issue.16, pp.4161-4169, 2005. ,
Platform for Identification of Salmonella Serovar Differentiating Bacterial Proteins by Top-Down Mass Spectrometry: S. Typhimurium vs S. Heidelberg, Analytical Chemistry, vol.86, issue.14, pp.6879-6886, 2014. ,
Top-Down Identification of Protein Biomarkers in Bacteria with Unsequenced Genomes, Analytical Chemistry, vol.81, issue.23, pp.9633-9642, 2009. ,
Enhanced Dissociation of Intact Proteins with High Capacity Electron Transfer Dissociation, Journal of The American Society for Mass Spectrometry, vol.27, issue.3, pp.520-531, 2015. ,
High resolution top-down experimental strategies on the Orbitrap platform, Journal of Proteomics, vol.175, pp.42-55, 2018. ,
Accurate Estimation of Context-Dependent False Discovery Rates in Top-Down Proteomics, Molecular & Cellular Proteomics, vol.18, issue.4, pp.796-805, 2019. ,
Benchmarking Multiple Fragmentation Methods on an Orbitrap Fusion for Top-down Phospho-Proteoform Characterization, Analytical Chemistry, vol.87, issue.8, pp.4152-4158, 2015. ,
Evaluation of the Compact High-Field Orbitrap for Top-Down Proteomics of Human Cells, Journal of Proteome Research, vol.11, issue.8, pp.4308-4314, 2012. ,
Top-Down Proteomics by Means of Orbitrap Mass Spectrometry, Shotgun Proteomics, pp.465-487, 2014. ,
Top-Down Characterization of Heavily Modified Histones Using 193 nm Ultraviolet Photodissociation Mass Spectrometry, Journal of Proteome Research, vol.17, issue.3, pp.1138-1145, 2018. ,
Maximizing Sequence Coverage in Top-Down Proteomics By Automated Multimodal Gas-Phase Protein Fragmentation, Analytical Chemistry, vol.90, issue.21, pp.12519-12526, 2018. ,
Intact protein separation by chromatographic and/or electrophoretic techniques for top-down proteomics, Journal of Chromatography A, vol.1218, issue.49, pp.8760-8776, 2011. ,
Evaluation of sample preparation methods for MALDI-TOF MS identification of highly dangerous bacteria, Letters in Applied Microbiology, vol.55, issue.1, pp.40-46, 2012. ,
A robust two-dimensional separation for top-down tandem mass spectrometry of the low-mass proteome, Journal of the American Society for Mass Spectrometry, vol.20, issue.12, pp.2183-2191, 2009. ,
The Family Enterobacteriaceae, The Prokaryotes, pp.225-286, 2014. ,
Accurate differentiation of Escherichia coli and Shigella serogroups: challenges and strategies, New Microbes and New Infections, vol.21, pp.58-62, 2018. ,
The PRIDE database and related tools and resources in 2019: improving support for quantification data, Nucleic Acids Research, vol.47, issue.D1, pp.D442-D450, 2018. ,