A virocentric perspective on the evolution of life, Curr. Opin. Virol, vol.3, pp.546-557, 2013. ,
Viruses in the sea, Nature, vol.437, pp.356-361, 2005. ,
High abundance of viruses found in aquatic environments, Nature, vol.340, pp.467-468, 1989. ,
Are there 10 31 virus particles on earth, or more, or fewer? J. Bacteriol, vol.202, pp.52-72, 2020. ,
Physical principles in the construction of regular viruses, Cold Spring Harb. Symp. Quant. Biol, vol.27, pp.1-24, 1962. ,
DNA mismatch repair and the DNA damage response, DNA Repair (Amst.), vol.38, pp.94-101, 2016. ,
Bacteria-to-human protein networks reveal origins of endogenous DNA damage, Cell, vol.176, pp.127-143, 2019. ,
The helical arrangement of the protein subunits in tobacco mosaic virus, Biochim. Biophys. Acta, vol.21, pp.405-406, 1956. ,
Viruses of archaea: Structural, functional, environmental and evolutionary genomics, Virus Res, vol.244, pp.181-193, 2018. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977349
The enigmatic archaeal virosphere, Nat. Rev. Microbiol, vol.15, pp.724-739, 2017. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977353
The wonderful world of archaeal viruses, Annu. Rev. Microbiol, vol.67, pp.565-585, 2013. ,
Archaeal viruses from hightemperature environments, Genes (Basel), vol.9, p.128, 2018. ,
Astrovirology: Viruses at large in the universe, Astrobiology, vol.18, pp.207-223, 2018. ,
Harnessed viruses in the age of metagenomics and synthetic biology: An update on infectious clone assembly and biotechnologies of plant viruses, Plant Biotechnol. J, vol.17, pp.1010-1026, 2019. ,
Physical, chemical, and synthetic virology: Reprogramming viruses as controllable nanodevices, Wiley Interdiscip. Rev. Nanomed. Nanobiotechnol, vol.11, p.1545, 2019. ,
Structure of a filamentous virus uncovers familial ties within the archaeal virosphere, Virus Evol, vol.6, p.23, 2020. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02568496
Structural conservation in a membrane-enveloped filamentous virus infecting a hyperthermophilic acidophile, Nat. Commun, vol.9, p.3360, 2018. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977327
Model for a novel membrane envelope in a filamentous hyperthermophilic virus, vol.6, p.26268, 2017. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977357
A virus that infects a hyperthermophile encapsidates Aform DNA, Virology, vol.348, pp.914-917, 2015. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977386
A new proposed taxon for double-stranded DNA viruses, the order "Ligamenvirales, Arch. Virol, vol.157, pp.791-795, 2012. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977408
New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities, ISME J, vol.14, pp.1821-1833, 2020. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02557115
A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon Sulfolobus, Virology, vol.267, pp.252-266, 2000. ,
Viral weapons of membrane destruction: Variable modes of membrane penetration by non-enveloped viruses, Curr. Opin. Virol, vol.1, pp.44-49, 2011. ,
Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging, Nat. Commun, vol.8, p.1436, 2017. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977352
A crystallographic map of the transition from B-DNA to A-DNA, Proc. Natl. Acad. Sci. U.S.A, vol.98, pp.7265-7270, 2001. ,
Cryo-EM: Ice is nice, but good ice can be hard to find, Biophys. J, vol.118, pp.1238-1239, 2020. ,
X-ray crystallographic analysis of the hydration of A-and B-form DNA at atomic resolution, Biopolymers, vol.48, pp.234-252, 1998. ,
Ordered water structure around a B-DNA dodecamer. A quantitative study, J. Mol. Biol, vol.163, pp.129-146, 1983. ,
Structure of a B-DNA dodecamer. III. Geometry of hydration, J. Mol. Biol, vol.151, pp.535-556, 1981. ,
Near-atomic resolution for one state of F-actin, Structure, vol.23, pp.173-182, 2015. ,
The molecular basis for flexibility in the flexible filamentous plant viruses, Nat. Struct. Mol. Biol, vol.22, pp.642-644, 2015. ,
Inference of macromolecular assemblies from crystalline state, J. Mol. Biol, vol.372, pp.774-797, 2007. ,
Synergy of NMR, computation, and X-ray crystallography for structural biology, Structure, vol.17, pp.499-507, 2009. ,
How significant is a protein structure similarity with TM-score = 0.5?, Bioinformatics, vol.26, pp.889-895, 2010. ,
Genome-based phylogeny and classification of prokaryotic viruses, Bioinformatics, vol.33, pp.3396-3404, 2017. ,
ICTV virus taxonomy profile: Potyviridae, J. Gen. Virol, vol.98, pp.352-354, 2017. ,
ICTV virus taxonomy profile: Closteroviridae, J. Gen. Virol, vol.101, pp.364-365, 2020. ,
URL : https://hal.archives-ouvertes.fr/hal-02562393
Ictv Report Consortium, ICTV virus taxonomy profile: Virgaviridae, J. Gen. Virol, vol.98, 1999. ,
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes, Nat. Microbiol, vol.4, pp.1895-1906, 2019. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02557242
Helical viruses, Adv. Exp. Med. Biol, vol.726, pp.631-658, 2012. ,
Multiple origins of viral capsid proteins from cellular ancestors, Proc. Natl. Acad. Sci. U.S.A, vol.114, pp.2401-2410, 2017. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977364
The tobacco mosaic virus particle: Structure and assembly, Philos. Trans. R. Soc. Lond. B Biol. Sci, vol.354, pp.531-535, 1999. ,
Phage liquid crystalline droplets form occlusive sheaths that encapsulate and protect infectious rod-shaped bacteria, Proc. Natl. Acad. Sci. U.S.A, vol.117, pp.4724-4731, 2020. ,
Atomic structure of potato virus X, the prototype of the Alphaflexiviridae family, Nat. Chem. Biol, vol.16, pp.564-569, 2020. ,
Potyvirus virion structure shows conserved protein fold and RNA binding site in ssRNA viruses, Sci. Adv, vol.3, p.2182, 2017. ,
Negative-strand RNA viruses: The plant-infecting counterparts, Virus Res, vol.162, pp.184-202, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00658370
Matrix proteins of enveloped viruses: A case study of influenza A virus M1 protein, J. Biomol. Struct. Dyn, vol.37, pp.671-690, 2019. ,
A virus of hyperthermophilic archaea with a unique architecture among DNA viruses, Proc. Natl. Acad. Sci. U.S.A, vol.113, pp.2478-2483, 2016. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01375493
The depths of virus exaptation, Curr. Opin. Virol, vol.31, pp.1-8, 2018. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01977329
Structure of a protein-DNA complex essential for DNA protection in spores of Bacillus species, Proc. Natl. Acad. Sci. U.S.A, vol.105, pp.2806-2811, 2008. ,
I will survive: DNA protection in bacterial spores, Trends Microbiol, vol.15, pp.172-180, 2007. ,
A packing for A-form DNA in an icosahedral virus, Proc. Natl. Acad. Sci. U.S.A, vol.116, pp.22591-22597, 2019. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02559906
Positively supercoiled DNA in a virus-like particle of an archaebacterium, Nature, vol.321, pp.256-258, 1986. ,
Sulfolobus spindle-shaped virus 1 contains glycosylated capsid proteins, a cellular chromatin protein, and host-derived lipids, J. Virol, vol.89, pp.11681-11691, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01430608
Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by cryoEM and X-ray crystallography, Proc. Natl. Acad. Sci. U.S.A, vol.110, pp.5504-5509, 2013. ,
Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon, Open Biol, vol.3, p.130010, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-00818894
Andromeda: A peptide search engine integrated into the MaxQuant environment, J. Proteome Res, vol.10, pp.1794-1805, 2011. ,
EMAN2: An extensible image processing suite for electron microscopy, J. Struct. Biol, vol.157, pp.38-46, 2007. ,
SPIDER and WEB: Processing and visualization of images in 3D electron microscopy and related fields, J. Struct. Biol, vol.116, pp.190-199, 1996. ,
A robust algorithm for the reconstruction of helical filaments using single-particle methods, Ultramicroscopy, vol.85, pp.225-234, 2000. ,
Helical reconstruction in RELION, J. Struct. Biol, vol.198, pp.163-176, 2017. ,
New tools for the analysis and validation of cryo-EM maps and atomic models, Acta Crystallogr. D Struct. Biol, vol.74, pp.814-840, 2018. ,
URL : https://hal.archives-ouvertes.fr/inserm-02409756
Electrostatics of nanosystems: Application to microtubules and the ribosome, Proc. Natl. Acad. Sci. U.S.A, vol.98, pp.10037-10041, 2001. ,