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RVDB-prot, a reference viral protein database and its HMM profiles [version 2; peer review: 2 approved]

Abstract : We present RVDB-prot, a database corresponding to the protein equivalent of the nucleic acid reference virus database RVDB. Protein databases can be helpful to perform more sensitive protein sequence comparisons. Similarly to its homologous public repository, RVDB-prot aims to provide reliable and accurately annotated unique entries, while including also an Hidden Markov Model (HMM) protein profiles database for distant protein searching.
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Contributor : Thomas Bigot <>
Submitted on : Wednesday, September 23, 2020 - 10:44:12 AM
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Thomas Bigot, Sarah Temmam, Philippe Pérot, Marc Eloit. RVDB-prot, a reference viral protein database and its HMM profiles [version 2; peer review: 2 approved]. F1000Research, Faculty of 1000, 2020, 8, pp.530. ⟨10.12688/f1000research.18776.2⟩. ⟨pasteur-02946473⟩

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