Small airway-on-a-chip enables analysis of human lung inflammation and drug responses in vitro, Nat. Methods, vol.13, pp.151-157, 2016. ,
The control of the false discovery rate in multiple testing under dependency, Ann. Stat, vol.29, pp.1165-1188, 2001. ,
Cholangiocyte biology, Curr. Opin. Gastroenterol, vol.23, pp.299-305, 2007. ,
Bile formation and secretion, Compr. Physiol, vol.3, pp.1035-1078, 2013. ,
Growth of epithelial organoids in a defined hydrogel, Adv. Mater, vol.30, p.1801621, 2018. ,
Culture and establishment of self-renewing human and mouse adult liver and pancreas 3D organoids and their genetic manipulation, Nat. Protoc, vol.11, pp.1724-1743, 2016. ,
Pathobiology of biliary epithelia, Biochim. Biophys. Acta Mol, pp.1220-1231, 2018. ,
Regenerative medicine and the biliary tree, Semin. Liver Dis, vol.37, pp.17-27, 2017. ,
Development and characterization of humaninduced pluripotent stem cell-derived cholangiocytes, Lab. Invest, vol.95, pp.684-696, 2015. ,
Characterization and growth regulation of a rat intrahepatic bile duct epithelial cell line under hormonally defined, serum-free conditions, In Vitro Cell Dev. Biol. Anim, vol.34, pp.704-710, 1998. ,
Pak1 regulates the orientation of apical polarization and lumen formation by distinct pathways, PLoS ONE, vol.7, p.41039, 2012. ,
Generation of functional cholangiocyte-like cells from human pluripotent stem cells and HepaRG cells, Hepatology, vol.60, pp.700-714, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01169803
Regulated ion transport in mouse liver cyst epithelial cells, Biochim. Biophys. Acta, vol.1772, pp.345-354, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00562741
Synthetic matrices reveal contributions of ECM biophysical and biochemical properties to epithelial morphogenesis, J. Cell Biol, vol.212, pp.113-124, 2016. ,
Matrix elasticity directs stem cell lineage specification, Cell, vol.126, pp.677-689, 2006. ,
A synthetic matrix with independently tunable biochemistry and mechanical properties to study epithelial morphogenesis and EMT in a lung adenocarcinoma model, Cancer Res, vol.72, pp.6013-6023, 2012. ,
Designer matrices for intestinal stem cell and organoid culture, Nature, vol.539, pp.560-564, 2016. ,
Artificial niche microarrays for probing single stem cell fate in high throughput, Nat. Methods, vol.8, pp.949-955, 2011. ,
Ductular network formation by rat biliary epithelial cells in the dynamical culture with collagen gel and dimethylsulfoxide stimulation, Am. J. Pathol, vol.173, pp.494-506, 2008. ,
Microfabrication of human organs-on-chips, Nat. Protoc, vol.8, pp.2135-2157, 2013. ,
Ductular morphogenesis and functional polarization of normal human biliary epithelial cells in three-dimensional culture, J. Hepatol, vol.35, pp.2-9, 2001. ,
CPM is a useful cell surface marker to isolate expandable bi-potential liver progenitor cells derived from human iPS cells, Stem Cell Rep, vol.5, pp.508-515, 2015. ,
Substrate stiffness and matrix composition coordinately control the differentiation of liver progenitor cells, Biomaterials, vol.99, pp.82-94, 2016. ,
Development and characterization of cholangioids from normal and diseased human cholangiocytes as an in vitro model to study primary sclerosing cholangitis, Lab. Invest, vol.97, pp.1385-1396, 2017. ,
Synthesis and physicochemical characterization of end-linked poly(ethylene glycol)-co-peptide hydrogels formed by Michael-type addition, Biomacromolecules, vol.4, pp.713-722, 2003. ,
Epithelial polarity-generating and integrating signals from the ECM with integrins, Exp. Cell Res, vol.334, pp.337-349, 2015. ,
Cell-polarity dynamics controls the mechanism of lumen formation in epithelial morphogenesis, Curr. Biol, vol.18, pp.507-513, 2008. ,
Scanning electron microscopy of kidney cells in culture: surface features of polarized epithelia, Scan. Electron Microsc, pp.1135-1150, 1986. ,
In situ cell manipulation through enzymatic hydrogel photopatterning, Nat. Mater, vol.12, pp.1072-1078, 2013. ,
Liver stiffness: a novel parameter for the diagnosis of liver disease, Hepat. Med, vol.2, pp.49-67, 2010. ,
AASLD practice guidelines: evaluation of the patient for liver transplantation, Hepatology, vol.41, pp.1407-1432, 2005. ,
In vitro formation and expansion of cysts derived from human renal cortex epithelial cells, Kidney Int, vol.41, pp.1222-1236, 1992. ,
Opinion: building epithelial architecture: insights from three-dimensional culture models, Nat. Rev. Mol. Cell. Biol, vol.3, pp.531-537, 2002. ,
Directed differentiation of cholangiocytes from human pluripotent stem cells, Nat. Biotechnol, vol.33, pp.853-861, 2015. ,
Enhanced proteolytic degradation of molecularly engineered PEG hydrogels in response to MMP-1 and MMP-2, Biomaterials, vol.31, pp.7836-7845, 2010. ,
Molecularly engineered PEG hydrogels: a novel model system for proteolytically mediated cell migration, Biophys. J, vol.89, pp.1374-1388, 2005. ,
Neural tube morphogenesis in synthetic 3D microenvironments, Proc. Natl. Acad. Sci. U.S.A, vol.113, pp.6831-6839, 2016. ,
3D niche microarrays for systems-level analyses of cell fate, Nat. Commun, vol.5, p.4324, 2014. ,
Biliary differentiation and bile duct morphogenesis in development and disease, Int. J. Biochem. Cell Biol, vol.43, pp.245-256, 2011. ,
The influence of matrix properties on growth and morphogenesis of human pancreatic ductal epithelial cells in 3D, Biomaterials, vol.34, pp.5117-5127, 2013. ,
Efficient functional cyst formation of biliary epithelial cells using microwells for potential bile duct organisation in vitro, Sci Rep, vol.8, p.11086, 2018. ,
Nomenclature of the finer branches of the biliary tree: canals, ductules, and ductular reactions in human livers, Hepatology, vol.39, pp.1739-1745, 2004. ,
Cholangiocytes derived from human induced pluripotent stem cells for disease modeling and drug validation, Nat. Biotechnol, vol.33, pp.845-852, 2015. ,
Molecular cues guiding matrix stiffness in liver fibrosis, Biomed. Res. Int, p.2646212, 2016. ,
Determinants of fibrosis progression and regression in NASH, J. Hepatol, vol.68, pp.238-250, 2018. ,
Immunolocalization of extracellular matrix components and integrins during mouse liver development, Hepatology, vol.40, pp.346-355, 2004. ,
Patient-derived organoids from human bile: an in vitro method to study cholangiopathies, Methods Mol. Biol, pp.363-372, 1981. ,
Laminin 411 and 511 promote the cholangiocyte differentiation of human induced pluripotent stem cells, Biochem. Biophys. Res. Commun, vol.474, pp.91-96, 2016. ,
Generation of a vascularized and functional human liver from an iPSC-derived organ bud transplant, Nat. Protoc, vol.9, pp.396-409, 2014. ,
Cells lying on a bed of microneedles: an approach to isolate mechanical force, Proc. Natl. Acad. Sci. U.S.A, vol.100, pp.1484-1489, 2003. ,
Liver progenitor cells develop cholangiocyte-type epithelial polarity in three-dimensional culture, Mol. Biol. Cell, vol.18, pp.1472-1479, 2007. ,
Depletion of apical transport proteins perturbs epithelial cyst formation and ciliogenesis, J. Cell. Sci, vol.121, pp.1193-1203, 2008. ,
Epithelial organization and cyst lumen expansion require efficient Sec13-Sec31-driven secretion, J. Cell. Sci, vol.125, pp.673-684, 2012. ,
An algorithm-based topographical biomaterials library to instruct cell fate, Proc. Natl. Acad. Sci. U.S.A, vol.108, pp.16565-16570, 2011. ,
Development and characterization of polarized primary cultures of rat intrahepatic bile duct epithelial cells, Lab. Invest, vol.74, pp.303-313, 1996. ,
The role of matrix stiffness in regulating cell behavior, Hepatology, vol.47, pp.1394-1400, 2008. ,
Elastic modulus measurements of human liver and correlation with pathology, Ultrasound Med. Biol, vol.28, pp.467-474, 2002. ,
Formation of cysts by alveolar type II cells in three-dimensional culture reveals a novel mechanism for epithelial morphogenesis, Mol. Biol. Cell, vol.18, pp.1693-1700, 2007. ,