E. Afgan, D. Baker, M. Van-den, D. Beek, D. Blankenberg et al., The Galaxy Platform for Accessible, Reproducible and Collaborative Biomedical Analyses: 2016 Update, vol.44, pp.3-10, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01360125

. Ashburner, C. A. Michael, J. A. Ball, D. Blake, H. Botstein et al., Gene Ontology: Tool for the Unification of Biology, Nature Genetics, vol.25, issue.1, pp.25-29, 2000.

M. Bostock, V. Ogievetsky, and J. Heer, D 3 Data-Driven Documents, IEEE Transactions on Visualization and Computer Graphics, vol.17, issue.12, p.2301, 2011.

,

B. Brancotte, M. Bedri, J. Lorenzo, P. Sandrine, F. Séné et al., Biosphere Web : un portail haut niveau pour une utilisation bioinformatique des clouds, JOBIM (Journées Ouvertes Biologie Informatique Mathématiques, vol.45, pp.331-338, 2016.

R. Hoehndorf, L. Slater, P. N. Schofield, and G. V. Gkoutos, Aber-Owl: A Framework for Ontology-Based Data Access in Biology, BMC Bioinformatics, vol.16, issue.1, p.26, 2015.

J. Ison, M. Kala?, I. Jonassen, D. Bolser, M. Uludag et al., EDAM: An Ontology of Bioinformatics Operations, Types of Data and Identifiers, Topics and Formats, Bioinformatics, vol.29, issue.10, pp.1325-1357, 2013.

J. Ison, K. Rapacki, H. Ménager, M. Kala?, E. Rydza et al., Tools and Data Services Registry: A Community Effort to Document Bioinformatics Resources, Nucleic Acids Research, vol.44, issue.D1, pp.38-47, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01594840

S. Jupp, T. Burdett, C. Leroy, and H. E. Parkinson, A New Ontology Lookup Service at Embl-Ebi, SWAT4LS, pp.118-137, 2015.

T. Tudorache, C. Nyulas, N. F. Noy, and M. A. Musen, WebProtégé: A Collaborative Ontology Editor and Knowledge Acquisition Tool for the Web, Semantic Web, vol.4, pp.89-99, 2013.

P. L. Whetzel, N. F. Noy, H. Nigam, . Shah, C. Paul-r-alexander et al., BioPortal: Enhanced Functionality via New Web Services from the National Center for Biomedical Ontology to Access and Use Ontologies in Software Applications, Nucleic Acids Research, vol.39, issue.suppl_2, pp.541-545, 2011.

Z. Xiang and C. Mungall, Ontobee: A Linked Data Server and Browser for Ontology Terms, ICBO, 2011.

. Brancotte, A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it, Journal of Open Source Software, vol.3, issue.27, 2018.
URL : https://hal.archives-ouvertes.fr/pasteur-02770161