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, AsenCMV1 (KU963225), AmacCMV1 (KU963227), ApanCMV1 (KU963228)
, SalbCMV1 (KU963231), SaHV4 (FJ483967), CapeCMV1 (KU963230), CebHV1 (JQ264772)
, MndCMV (AY129399), BaCMV (NC_027016), CeHV5 strains (JQ264771 and FJ483968), MfasCMV1 strains (KP796148 and AY728171), McHV3 (AF033184 and DQ120516)
, CgueCMV1.1 (AY129397), GgorCMV2.1 (FJ538490), PnHV2 (AF480884), and HHV5 strains (M14709, AC146905 and AY315197)
, Phylogenetic tree of Gammaherpesvirus DNA polymerase sequences. The phylogenetic tree was derived from the partial nucleotide sequences of the DNA polymerase gene (489 bp) of 80 representatives of gammaherpesviruses using the Bayesian method with the GTR
All resolved nodes have posterior probability greater than 0.75. A scale indicating divergence, as substitutions per site, is at the foot. Sequences generated in this study are in boldface. The virus names are associated with their accession numbers. For bat viruses, the host species from which the virus has been detected is indicated after the virus name, Herpes simplex virus type 1 sequence (HHV1 M10792) served as outgroup ,
, Ccro for Crocuta crocuta, Ezeb for Equus zebra, Pvam for Pteropus vampyrus, Sara for Sorex araneus, Lruf for Lynx rufus, Fcat for Felis catus, Tbel for Tupaia belangeri, Emax for Elephas maximus, Deca for Diphylla ecaudata, Pham for Papio hamadryas, Ggor for Gorilla gorilla, Mfas for by the posterior probabilities of the corresponding clades. All resolved nodes have posterior probability greater than 0.7. A scale indicating divergence, as substitutions per site, is at the foot. Sequences generated in this study are in boldface. The virus names are associated with their accession numbers, LCV (Lymphocryptovirus), RHV (Rhadinovirus), or HV (Herpesvirus) and an Arabic numeral (1, 2, 3, 4) depending on the virus. Therefore, Rfer stands for Rhinolophus ferrumequinum
, Symphalangus syndactylus lymphocryptovirus 2, CpRHV2 for Caprine herpesvirus 2, p.1
, for Mustelid herpesvirus 1 and RGHV1 for Rhinolophus gammaherpesvirus 1. The different well-supported bat gammaherpesvirus clades are indicated by letters (a, b, ?, j) on the right-hand side. OWPRHV on the right-hand side stands for Old World primate Rhadinovirus