Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
Evelien Adriaenssens
(1)
,
Matthew Sullivan
(2, 3)
,
Petar Knezevic
(4)
,
Leonardo J. van Zyl
(5)
,
B. Sarkar
(6)
,
Bas E Dutilh
(7, 8)
,
Poliane Alfenas-Zerbini
(9)
,
Małgorzata Łobocka
(10)
,
Yigang Tong
(11)
,
James Rodney Brister
(12)
,
Andrea Moreno Switt
(13)
,
Jochen Klumpp
(14)
,
Ramy Karam Aziz
(15)
,
Jakub Barylski
(16)
,
Jumpei Uchiyama
(17)
,
Rob Edwards
(18)
,
Andrew Kropinski
(19, 20)
,
Nicola Petty
(21)
,
Martha R. C Clokie
(22)
,
Alla Kushkina
(23)
,
Vera Morozova
(24)
,
Siobain Duffy
(25)
,
Annika Gillis
(26)
,
Janis Rumnieks
(27)
,
İpek Kurtböke
(28)
,
Nina Chanishvili
(29)
,
Lawrence Goodridge
(19)
,
Johannes Wittmann
(30)
,
Rob Lavigne
(31)
,
Ho Bin Jang
(3)
,
David Prangishvili
(32, 33)
,
François Enault
(34)
,
Dann Turner
(35)
,
Minna Poranen
(36)
,
Hanna Oksanen
(36)
,
Mart Krupovic
(32)
1
Quadram Institute
2 CEGE - Department of Civil, Environmental and Geodetic Engineering [Columbus, USA]
3 OSU - Ohio State University [Columbus]
4 University of Novi Sad
5 IMBM - Institute for Microbial Biotechnology and Metagenomics [Cape Town, South Africa]
6 National Institute of Cholera and Enteric Diseases
7 Theoretical Biology and Bioinformatics [Utrecht, The Netherlands]
8 Radboud University Medical Center [Nijmegen]
9 UFV - Universidade Federal de Viçosa = Federal University of Viçosa
10 Institute of Biochemistry & Biophysics
11 Beijing University of Chemical Technology
12 NLM - National Library of Medicine
13 UNAB - Universidad Andrés Bello [Santiago]
14 IFNH - Institute of Food, Nutrition and Health [Zurich, Suisse]
15 Cairo University
16 UAM - Adam Mickiewicz University in Poznań
17 Azabu University
18 SDSU - San Diego State University
19 University of Guelph
20 Ontario Veterinary College [Univ. Guelph, Canada]
21 iThree Institute
22 University of Leicester
23 D.K. Zabolotny Institute of Microbiology and Virology [Kyiv, Ukraine]
24 ICBFM SB RAS - Institute of Chemical Biology and Fundamental Medicine [Novosibirsk, Russia]
25 Rutgers University [Newark]
26 Imperial College London
27 Latvian Biomedical Research and Study Centre [Rīga]
28 USC - University of the Sunshine Coast
29 George Eliava Institute of Bacteriophages, Microbiology and Virology [Tbilisi, Georgia]
30 DSMZ - Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH / Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures
31 BIOSYST - Department of Biosystems
32 Virologie des archées - Archaeal Virology
33 TSU - Ivane Javakhishvili Tbilisi State University
34 LMGE - Laboratoire Microorganismes : Génome et Environnement
35 Faculty of Health and Applied Sciences [Bristol, UK]
36 Faculty of Biological and Environmental Sciences [Helsinki]
2 CEGE - Department of Civil, Environmental and Geodetic Engineering [Columbus, USA]
3 OSU - Ohio State University [Columbus]
4 University of Novi Sad
5 IMBM - Institute for Microbial Biotechnology and Metagenomics [Cape Town, South Africa]
6 National Institute of Cholera and Enteric Diseases
7 Theoretical Biology and Bioinformatics [Utrecht, The Netherlands]
8 Radboud University Medical Center [Nijmegen]
9 UFV - Universidade Federal de Viçosa = Federal University of Viçosa
10 Institute of Biochemistry & Biophysics
11 Beijing University of Chemical Technology
12 NLM - National Library of Medicine
13 UNAB - Universidad Andrés Bello [Santiago]
14 IFNH - Institute of Food, Nutrition and Health [Zurich, Suisse]
15 Cairo University
16 UAM - Adam Mickiewicz University in Poznań
17 Azabu University
18 SDSU - San Diego State University
19 University of Guelph
20 Ontario Veterinary College [Univ. Guelph, Canada]
21 iThree Institute
22 University of Leicester
23 D.K. Zabolotny Institute of Microbiology and Virology [Kyiv, Ukraine]
24 ICBFM SB RAS - Institute of Chemical Biology and Fundamental Medicine [Novosibirsk, Russia]
25 Rutgers University [Newark]
26 Imperial College London
27 Latvian Biomedical Research and Study Centre [Rīga]
28 USC - University of the Sunshine Coast
29 George Eliava Institute of Bacteriophages, Microbiology and Virology [Tbilisi, Georgia]
30 DSMZ - Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH / Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures
31 BIOSYST - Department of Biosystems
32 Virologie des archées - Archaeal Virology
33 TSU - Ivane Javakhishvili Tbilisi State University
34 LMGE - Laboratoire Microorganismes : Génome et Environnement
35 Faculty of Health and Applied Sciences [Bristol, UK]
36 Faculty of Biological and Environmental Sciences [Helsinki]
Matthew Sullivan
- Function : Author
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- ORCID : 0000-0001-8398-8234
Petar Knezevic
- Function : Author
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Leonardo J. van Zyl
- Function : Author
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Poliane Alfenas-Zerbini
- Function : Author
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- ORCID : 0000-0002-8203-5244
Małgorzata Łobocka
- Function : Author
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Jakub Barylski
- Function : Author
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Rob Edwards
- Function : Author
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- ORCID : 0000-0001-8383-8949
Andrew Kropinski
Connectez-vous pour contacter l'auteur
- Function : Correspondent author
- PersonId : 1042517
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Alla Kushkina
- Function : Author
- PersonId : 800488
- ORCID : 0000-0002-2206-7324
Vera Morozova
- Function : Author
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Annika Gillis
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Janis Rumnieks
- Function : Author
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- ORCID : 0000-0001-8436-9910
İpek Kurtböke
- Function : Author
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Rob Lavigne
- Function : Author
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- ORCID : 0000-0001-7377-1314
- IdRef : 224163981
François Enault
- Function : Author
- PersonId : 784618
- ORCID : 0000-0002-4968-3995
Dann Turner
- Function : Author
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- ORCID : 0000-0002-0249-4513
Mart Krupovic
- Function : Author
- PersonId : 171469
- IdHAL : mart-krupovic
- ORCID : 0000-0001-5486-0098
- IdRef : 183277643
Abstract
This article is a summary of the activities of the ICTV's Bacterial and Archaeal Viruses Subcommittee for the years 2018 and 2019. Highlights include the creation of a new order, 10 families, 22 subfamilies, 424 genera and 964 species. Some of our concerns about the ICTV's ability to adjust to and incorporate new DNA- and protein-based taxonomic tools are discussed.