Emerging and neglected infectious diseases: Insights, advances and challenges, BioMed Res. Int, p.5245021, 2017. ,
Arboviral Encephalitides: Transmission, Emergence, and Pathogenesis, J. Neuroimmune Pharmacol, vol.5, pp.428-442, 2010. ,
Human arbovirus infections worldwide, Ann. N. Y. Acad. Sci, pp.13-25, 2001. ,
The emergence of arthropod-borne viral diseases: A global prospective, dengue, chikungunya and zika fevers, Acta Trop, vol.166, pp.155-163, 2017. ,
Abubakar, I. The effect of global change in mosquito-borne diseases, Lancet Infect. Dis, vol.19, pp.30161-30167, 2019. ,
Global spread of dengue virus types: Mapping the 70 year history, Trends Microbiol, vol.22, pp.138-146, 2014. ,
Zika virus: A basic overview of an emerging arboviral infection in the Western hemisphere, vol.10, pp.707-712, 2016. ,
Reconstruction of Zika virus in Brazil, Emerg. Infect. Dis, vol.23, pp.92-94, 2017. ,
Chikungunya: Evolutionary history and recent epidemic spread, Antivir. Res, vol.120, pp.32-39, 2015. ,
Chikungunya virus infection: An overview, New Microbiol, vol.36, pp.211-227, 2013. ,
The continuing spread of West Nile virus in the Western hemisphere, Clin. Infect. Dis, vol.45, pp.1039-1046, 2007. ,
Improving Vector-Borne Pathogen Surveillance: A Laboratory-Based Study Exploring the Potential to Dengue Virus and Malaria Parasites in Mosquito Saliva, J. Vector Borne Dis, pp.301-310, 2017. ,
A Simple Non-Powered Pasive Trap for the Collection of Mosquitoes for Arbovirus Surveillance, J. Med. Entomol, vol.50, pp.185-194, 2013. ,
Development and Field Evaluation of the Sentinel Mosquito Arbovirus Capture Kit (SMACK). Parasites Vectors, vol.8, p.509, 2015. ,
VirusDetect: An automated pipeline for efficient virus discovery using deep sequencing of small RNAs, vol.500, pp.130-138, 2017. ,
Exploiting Mosquito Sugar Feeding to Detect Mosquito-Borne Pathogens, vol.107, pp.11255-11259, 2010. ,
Applications of a Sugar-Based Surveillance System to Track Arboviruses in Wild Mosquito Populations. Vector Borne Zoonotic Dis, vol.14, pp.66-73, 2014. ,
Converting Mosquito Surveillance to Arbovirus Surveillance with Honey-Baited Nucleic Acid Preservation Cards. Vector Borne Zoonotic Dis, vol.15, pp.397-403, 2015. ,
Evaluation of honey-baited FTA cards in combination with different mosquito traps in an area of low arbovirus prevalence. Parasite Vectors, vol.12, p.554, 2019. ,
Metagenomic identification of viralpathogens, Trends Biotechnol, vol.31, pp.257-279, 2013. ,
Viral metagenomics, Rev. Med. Virol, vol.17, pp.115-131, 2007. ,
New dimensions of the virus world discovered by metagenomics, Trends Microbiol, vol.18, pp.11-19, 2010. ,
A decade of RNA virus metagenomics is (not) enough, Virus Res, vol.244, pp.218-219, 2018. ,
The discovery and Global Distribution of Novel Mosquito-Associated Viruses in the Last Decade, Rev. Med. Virol, vol.29, p.2079, 2007. ,
Sensitivity and Specificity of Metatranscriptomics as an Arbovirus Surveillance Tool. Sci Rep, vol.9, 2019. ,
Usutu Virus Sequences in Culex pipiens (Diptera: Culicidae), Spain. Emerg Infect. Dis, vol.14, pp.861-863, 2008. ,
Evolution of Mosquito-Based Arbovirus Surveillance Systems in Australia, J. Biomed. Biotechnol, p.325659, 2012. ,
, Les moustiques d'Europe. Logiciel d´identification et d´enseignement. IRD Editions, 2001.
Diversity of Viruses in Ixodes ricinus, and characterization of a neurotropic strain of Eyach virus, New Microbes New Infect, vol.11, pp.71-81, 2016. ,
Next Generation Sequencing Uncovers Unexpected Bacterial Pathogens in Ticks in Western Europe, Plos One, vol.8, p.81439, 2013. ,
Monitoring silent spillovers before emergence: A pilot study at the tick/human interface in Thailand, Front. Microbiol, 2019. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02318851
AlienTrimmer removes adapter oligonucleotides with high sensitivity in shortinsert paired-end reads, Commentary on Turner, vol.5, p.130, 2014. ,
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph, Bioinformatics, vol.31, pp.1674-1676, 2015. ,
RVDB-prot, a reference viral protein database and its HMM profiles [version 1; peer review: Awaiting peer review, vol.8, p.530, 2019. ,
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucl. Acids. Symp. Ser, vol.41, pp.95-98, 1999. ,
Molecular Evolutionary Genetics Analysis across computing platforms, Mol Biol Evol, vol.35, pp.1547-1549, 2018. ,
Molecular Evolution and Phylogenetics, 2000. ,
Dating the human-ape split by a molecular clock of mitochondrial DNA, J. Mol Evol, vol.22, pp.160-174, 1985. ,
Redefining the Invertebrate RNA Virosphere, Nature, vol.540, pp.539-543, 2016. ,
Mosquito-Specific Viruses-Transmission and Interaction, vol.11, p.873, 2019. ,
Virome of >12 thousand Culex mosquitoes from throughout California, Virology, pp.74-88, 2018. ,
Bioinformatic characterization of Mosquito Viromes within the Eastern United States and Puerto Rico: Discovery of Novel Viruses, Evol. Bioinform, vol.12, pp.1-12, 2016. ,
De novo profiling of RNA viruses in Anopheles malaria vector mosquitoes from forest ecological zones in Senegal and Cambodia, p.664, 1920. ,
URL : https://hal.archives-ouvertes.fr/hal-02289783
Detection of RNA-Dependent RNA Polymerase of Hubei Reo-like Virus 7 by Next-Generation Sequencing in Aedes aegypti and in Culex quinquefasciatus Mosquitoes from Brazil, vol.11, p.147, 2019. ,
Viromics Reveal a Number of Novel RNA Viruses in Swedish Mosquitoes, Viruses, vol.11, p.1027, 2019. ,
Stable Distinct Core Eukaryotic Viromes in Different Mosquito Species from Guadeloupe, Using Single mosquito Viral Metagenomics, vol.7, p.121, 2019. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02278678
Metagenomics Analysis Reveals Three Novel and Prevalent Mosquito Viruses from a Single Pool of Aedes vexans niponni Collected in the Republic of Korea, Viruses, vol.11, p.222, 2019. ,
Meta-Transcriptomic Comparison of the RNA Viromes of Mosquito Vectors Culex pipiens and Culex torrentium in Northern Europe, Viruses, vol.11, p.1033, 2019. ,
Metagenomic Virome Analysis of Culex Mosquitoes from Kenya and China, Viruses, vol.10, p.30, 2018. ,
Genetic Characterization of a Novel Picronalike Virus in Culex spp. Mosquitoes from Mozambique, Virol J, vol.15, p.71, 2018. ,
A Metagenomic Survey of Viral Abundance and Diversity in Mosquitoes from Hubei Province, Plos One, vol.10, p.129845, 2015. ,
Novel Viruses Discovery and Genome Reconstruction form Field RNA Samples Reveals Highly Divergent Viruses in Dipteran Hosts, Plos One, vol.8, p.80720, 2013. ,
Comparative Metagenomic Profiling of Viromes Associated with Four Common Mosquito species in China, Virol Sin, vol.33, pp.59-66, 2018. ,
Nora Virus, a Persistent Virus in Drosophila, Defines a New Picorna-like Virus Family, J. Gen. Virol, vol.87, pp.3045-3051, 2006. ,
Genomic Characterization of a Novel Virus of the Family Tymoviridae Isolated from Mosquitoes, Plos One, vol.7, p.39845, 2012. ,
Arboviral Bottlenecks and Challenges to Maintaining Diversity and Fitness during Mosquito Transmission, Viruses, vol.6, pp.3991-4004, 2014. ,
RNA Shutgun Metagenomic Sequencing of Northern California (USA) Mosquitoes Uncovers Viruses, Bacteria, and Fungi. Front. Microbiol, vol.6, p.185, 2015. ,
Mesoniviridae: A Proposed New Family in the Order Nidovirales formed by a Single Species of Mosquito-Borne Viruses, Arch. Virol, vol.157, pp.1623-1628, 2012. ,
First Detection of a Mesonivirus in Culex pipiens in Five Countries Around the Mediterranean Basin, Abstract. EPIZONE-11th Annual Meeting, pp.19-21, 2017. ,
Mesoniviruses are Mosquito-Specific Viruses with Extensive Geographic Distribution and Host Range, Virol J, p.97, 2014. ,
Genome Sequences of Five Arboviruses in Field-Captured Mosquitoes in a Unique Rural Environment of South Korea, Genome Announc, vol.4, pp.1644-1659, 2016. ,
Unprecedented Genomic Diversity of RNA Viruses in Arthropods Reveals the Ancestry of Negative-Sense RNA Viruses, vol.4, p.5378, 2015. ,
Evidence of Efficient Transovarial Transmission of Culex Flavivirus by Culex pipiens (Diptera: Culicidae), J. Med. Entomol, vol.48, 2011. ,
Discovery and High Prevalence of Phasi Charoen-like Virus in Field-Captured Aedes aegypti in South China, Virology, vol.523, pp.35-40, 2018. ,
Insect-Specific Viruses Detected in Laboratory Mosquito Colonies and Their Potential Implications in Experiments Evaluating Arbovirus vector Competence, Am. J. Trop. Med. Hyg, vol.92, pp.422-428, 2015. ,
Insect-Specific Flaviviruses from Culex Mosquitoes in Colorado, with Evidence of Vertical Transmission, Am. J. Trop. Med. Hyg, vol.85, pp.169-177, 2011. ,
Insect-Specific Virus Discovery: Significance for the Arbovirus Community, vol.7, pp.4911-4928, 2015. ,
Are Arthropods at the Heart of Virus Evolution? eLife 2015, 4, e05378 ,
Insect-Specific Virus Evolution and Potential Effects in Vector Competence, Virus Genes, vol.55, pp.127-137, 2019. ,
Transmission Dynamics of an Insect-Specific Flavivirus in a Naturally Infected Culex pipiens Laboratory Colony and Effects of Co-Infection on Vector Competence for West Nile Virus, Virology, vol.427, pp.90-97, 2012. ,
Cell-Fusing Agent Virus Reduces Arbovirus Dissemination in Aedes aegypti Mosquitoes In Vivo, J. Virol, vol.93, pp.705-724, 2019. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02274832
Field-Captured Aedes vexans (Meigen, 1830) is a Competent Vector for Rift Valley Fever Phlebovirus in Europe, Parasit Vectors, vol.12, p.484, 2019. ,
Insect-Specific Viruses and their Potential Impact on Arbovirus Transmission, Curr Opin Virol, vol.15, pp.69-74, 2015. ,