Molecular rearrangement of mating-type genes in fission yeast, Nature, vol.296, issue.5858, p.7070512, 1982. ,
Four matingtype genes control sexual differentiation in the fission yeast, EMBO J, vol.7, issue.5, p.2900761, 1988. ,
Cell type switching by DNA transposition in fission yeast, Nature, vol.305, pp.682-688, 1983. ,
Gene activation by copy transposition in mating-type switching of a homothallic fission yeast, Curr Genet, vol.3, issue.1, pp.5-12, 1981. ,
Two tightly linked silent cassettes in the mating-type region of Schizosaccharomyces pombe, Curr Genet, vol.8, issue.3, pp.199-203, 1984. ,
Transcriptional silencing in fission yeast, Journal of Cellular Physiology, vol.184, issue.3, pp.311-318, 2000. ,
Four chromo-domain proteins of Schizosaccharomyces pombe differentially repress transcription at various chromosomal locations, Genetics, vol.155, issue.2, p.10835380, 2000. ,
Expression-state boundaries in the mating-type region of fission yeast, Genetics, vol.161, issue.2, p.12072458, 2002. ,
Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries, Science, vol.293, issue.5532, pp.1150-1155, 2001. ,
A recombinationally repressed region between mat2 and mat3 loci shares homology to centromeric repeats and regulates directionality of mating-type switching in fission yeast, Genetics, vol.146, issue.4, p.9258669, 1997. ,
Fission yeast switches mating type by a replication-recombination coupled process, EMBO J, vol.19, issue.6, pp.1389-1396, 2000. ,
Formation, maintenance and consequences of the imprint at the mating-type locus in fission yeast, EMBO J, vol.23, issue.4, pp.930-938, 2004. ,
The mutator gene swi8 effects specific mutations in the mating-type region of Schizosaccharomyces pombe, Genetics, vol.138, issue.3, p.7851760, 1994. ,
Does S. pombe exploit the intrinsic asymmetry of DNA synthesis to imprint daughter cells for mating-type switching?, Trends, vol.17, issue.3, p.11226610, 2001. ,
Mating-Type Cassettes: Structure, Switching and Silencing, The Molecular Biology of Schizosaccharomyces pombe, pp.129-147, 2004. ,
A Unique DNA Recombination Mechanism of the Mating/Cell-type Switching of Fission Yeasts: a, Review. Microbiol Spectr, vol.2, issue.5, 2014. ,
Molecular and cellular dissection of mating-type switching steps in Schizosaccharomyces pombe, Mol Cell Biol, vol.25, issue.1, pp.303-311, 2005. ,
,
Orientation of DNA replication establishes mating-type switching pattern in S-pombe, Nature, vol.400, issue.6740, pp.181-184, 1999. ,
Identification of a novel type of spacer element required for imprinting in fission yeast, PLoS Genet, vol.7, issue.3, p.1001328, 2011. ,
A programmed strand-specific and modified nick in S. pombe constitutes a novel type of chromosomal imprint, Curr Biol, vol.14, issue.21, pp.1924-1928, 2004. ,
The wild-type Schizosaccharomyces pombe mat1 imprint consists of two ribonucleotides, EMBO Rep, vol.7, issue.1, pp.59-65, 2006. ,
Mapping the double-strand breaks at the mating-type locus in fission yeast by genomic sequencing, EMBO J, vol.8, issue.1, p.2714252, 1989. ,
Directionality of fission yeast matingtype interconversion is controlled by the location of the donor loci, Genetics, vol.134, issue.4, p.8375648, 1993. ,
Initiation of meiotic recombination by double-strand DNA breaks in S. pombe, Cell, vol.46, issue.5, p.3742597, 1986. ,
Mus81 is essential for sister chromatid recombination at broken replication forks, EMBO J, vol.27, issue.9, pp.1378-1387, 2008. ,
The smt-0 mutation, 1993. ,
S. pombe LSD1 homologs regulate heterochromatin propagation and euchromatic gene transcription, Mol Cell, vol.26, issue.1, pp.89-101, 2007. ,
URL : https://hal.archives-ouvertes.fr/in2p3-00000365
LSD1 demethylates histone and non-histone proteins, Epigenetics, vol.4, issue.3, p.19395867, 2009. ,
Swi1 and Swi3 are components of a replication fork protection complex in fission yeast, Mol Cell Biol, vol.24, pp.8342-8355, 2004. ,
Sap1, a protein that binds to sequences required for mating-type switching, is essential for viability in Schizosaccharomyces pombe, Mol Cell Biol, vol.14, issue.3, p.8114737, 1994. ,
The mating type switch-activating protein Sap1 is required for replication fork arrest at the rRNA genes of fission yeast, Mol Cell Biol, vol.25, pp.8755-8761, 2005. ,
,
Sap1p binds to Ter1 at the ribosomal DNA of Schizosaccharomyces pombe and causes polar replication fork arrest, J Biol Chem, vol.280, issue.47, pp.39135-39142, 2005. ,
CENP-B preserves genome integrity at replication forks paused by retrotransposon LTR, Nature, vol.469, issue.7328, pp.112-115, 2011. ,
DOI : 10.1038/nature09608
URL : https://hal.archives-ouvertes.fr/pasteur-02013953
Sap1 is a replication-initiation factor essential for the assembly of pre-replicative complex in the fission yeast Schizosaccharomyces pombe, J Biol Chem, vol.292, issue.15, pp.6056-6075, 2017. ,
Arrested replication forks guide retrotransposon integration, Science, vol.349, issue.6255, pp.1549-1553, 2015. ,
DOI : 10.1126/science.aaa3810
URL : https://science.sciencemag.org/content/sci/349/6255/1549.full.pdf
, , 2015.
, Single-Nucleotide-Specific Targeting of the Tf1 Retrotransposon Promoted by the DNA-Binding Protein Sap1 of Schizosaccharomyces pombe, Genetics, vol.201, issue.3, pp.905-203
Shelterin components mediate genome reorganization in response to replication stress, Proc Natl Acad Sci, vol.114, issue.21, pp.5479-5484, 2017. ,
Fission yeast Sap1 protein is essential for chromosome stability, Eukaryotic Cell, vol.2, issue.5, pp.910-921, 2003. ,
The fission yeast homologue of CENP-B, Abp1, regulates directionality of matingtype switching, EMBO J, vol.27, issue.7, pp.1029-1038, 2008. ,
A homolog of male sex-determining factor SRY cooperates with a transposon-derived CENP-B protein to control sexspecific directed recombination, Proc Natl Acad Sci, vol.108, pp.18754-18759, 2011. ,
Going in the right direction: mating-type switching of Schizosaccharomyces pombe is controlled by judicious expression of two different swi2 transcripts, Genetics, vol.190, issue.3, pp.977-987, 2012. ,
A novel switch-activating site (SAS1) and its cognate binding factor (SAP1) required for efficient mat1 switching in Schizosaccharomyces pombe, EMBO J, vol.10, issue.10, p.1915277, 1991. ,
, , 2007.
, Genome-wide dynamics of SAPHIRE, an essential complex for gene activation and chromatin boundaries, Mol Cell Biol, vol.27, issue.11, pp.4058-4069
, , pp.2044-2050
A role for TFIIIC transcription factor complex in genome organization, Cell, vol.125, issue.5, pp.859-872, 2006. ,
Host genome surveillance for retrotransposons by transposon-derived proteins, Nature, vol.451, issue.7177, pp.431-436, 2008. ,
RNase-sensitive DNA modification(s) initiates S. pombe mating-type switching, Genes Dev, vol.18, issue.7, pp.794-804, 2004. ,
DOI : 10.1101/gad.289404
URL : http://genesdev.cshlp.org/content/18/7/794.full.pdf
A site-and strand-specific DNA break confers asymmetric switching potential in fission yeast, EMBO J, vol.17, issue.15, pp.4503-4510, 1998. ,
DOI : 10.1093/emboj/17.15.4503
URL : http://emboj.embopress.org/content/embojnl/17/15/4503.full.pdf
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1, Cell, vol.119, issue.7, pp.941-953, 2004. ,
DOI : 10.1016/j.cell.2004.12.012
URL : https://doi.org/10.1016/j.cell.2004.12.012
LSD1 demethylates repressive histone marks to promote androgen-receptordependent transcription, Nature, vol.437, issue.7057, pp.436-439, 2005. ,
DOI : 10.1038/nature04020
Chromatin regulation: how complex does it get, Epigenetics, vol.9, issue.11, pp.1485-1495, 2014. ,
DOI : 10.4161/15592294.2014.971580
URL : http://www.tandfonline.com/doi/pdf/10.4161/15592294.2014.971580?needAccess=true
Recognition of unmethylated histone H3 lysine 4 links BHC80 to LSD1-mediated gene repression, Nature, vol.448, issue.7154, pp.718-722, 2007. ,
DOI : 10.1038/nature06034
URL : http://europepmc.org/articles/pmc2702779?pdf=render
A core-BRAF35 complex containing histone deacetylase mediates repression of neuronal-specific genes, Proc Natl Acad Sci, vol.99, issue.11, pp.7420-7425, 2002. ,
, , 2007.
, Genome-wide studies of histone demethylation catalysed by the fission yeast homologues of mammalian LSD1, PLoS ONE, vol.2, issue.4, p.386
, Fission yeast homologs of human histone H3 lysine 4, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00171620
, demethylase regulate a common set of genes with diverse functions, J Biol Chem, vol.281, issue.47, pp.35983-35988
Lid2 is required for coordinating H3K4 and H3K9 methylation of heterochromatin and euchromatin, Cell, vol.135, issue.2, pp.272-283, 2008. ,
Molecular genetic analysis of fission yeast Schizosaccharomyces pombe, Molecular Methods Enzymol, vol.194, pp.795-823, 1991. ,
A replication fork barrier at the 3? end of yeast ribosomal RNA genes, Cell, vol.55, issue.4, pp.637-643, 1988. ,
Identification of Proteins Involved in the Regulation of Yeast Iso-1-Cytochrome-C Expression by Oxygen, EMBO J, vol.4, issue.10, p.2996882, 1985. ,
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome, Genome Biol, vol.10, issue.3, p.25, 2009. ,
BamTools: a C++ API and toolkit for analyzing and managing BAM files, Bioinformatics, vol.27, issue.12, pp.1691-1692, 2011. ,
Fast and accurate short read alignment with Burrows-Wheeler transform, Bioinformatics, vol.25, issue.14, pp.1754-1760, 2009. ,
Modelbased analysis of ChIP-Seq (MACS), Genome Biol, vol.9, issue.9, p.137, 2008. ,
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia, Genome Res, vol.22, issue.9, pp.1813-1831, 2012. ,
BEDTools: a flexible suite of utilities for comparing genomic features, Bioinformatics, vol.26, issue.6, pp.841-842, 2010. ,
DOI : 10.1093/bioinformatics/btq033
URL : https://academic.oup.com/bioinformatics/article-pdf/26/6/841/16897802/btq033.pdf
Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells, Cell, vol.151, issue.3, pp.671-683, 2012. ,
bwtool: a tool for bigWig files, Bioinformatics, vol.30, issue.11, pp.1618-1619, 2014. ,
DOI : 10.1093/bioinformatics/btu056
URL : https://academic.oup.com/bioinformatics/article-pdf/30/11/1618/17141666/btu056.pdf