G. Eberl, M. Colonna, D. Santo, J. Mckenzie, and A. , Innate lymphoid cells: A new paradigm in immunology, Science, vol.15, issue.5, pp.6566-247, 2015.
DOI : 10.1038/ni.2830
URL : https://hal.archives-ouvertes.fr/pasteur-01402704

N. Serafini, C. Vosshenrich, D. Santo, and J. , Transcriptional regulation of innate lymphoid cell fate, Nature Reviews Immunology, vol.157, issue.7, pp.415-443, 2015.
DOI : 10.1016/j.cell.2014.08.026
URL : https://hal.archives-ouvertes.fr/pasteur-01168713

S. Mueller and L. Mackay, Tissue-resident memory T cells: local specialists in immune defence, Nature Reviews Immunology, vol.5, issue.2, pp.79-89, 2016.
DOI : 10.1172/JCI63287

G. Eberl, Immunity by equilibrium, Nature Reviews Immunology, vol.17, issue.8, pp.524-556, 2016.
DOI : 10.1038/ni.3318
URL : https://hal.archives-ouvertes.fr/hal-01402375

G. Eberl, A new vision of immunity: homeostasis of the superorganism, Mucosal Immunology, vol.41, issue.5, pp.450-60, 2010.
DOI : 10.1016/j.immuni.2008.05.009
URL : https://hal.archives-ouvertes.fr/pasteur-00509637

D. Proctor, D. Relman, E. Wherry, R. Ahmed, . Na et al., The landscape ecology and microbiota of the human nose, 255 mouth, and throat 256 [7] Consortium HMP. Structure, function and diversity of the healthy human microbiome. 257 Redefining chronic viral infection, Cell Host Microbe Nature Cell, vol.21486138, issue.260, pp.421-32207, 2009.

, Innate lymphoid cells promote anatomical containment of lymphoid-resident

S. Sanos, V. Bui, A. Mortha, K. Oberle, C. Heners et al., CD4(+) Lymphoid 298 tissue-inducer cells promote innate immunity in the gut Induction of innate lymphoid 300 cell-derived interleukin-22 by the transcription factor STAT3 mediates protection 301 against intestinal infection 303 Lymphotoxin beta receptor signaling in intestinal epithelial cells orchestrates innate 304 immune responses against mucosal bacterial infection A T-bet 306 gradient controls the fate and function of CCR6-RORgammat+ innate lymphoid cells. 307 The microbiota 309 regulates neutrophil homeostasis and host resistance to Escherichia coli K1 sepsis in 310 neonatal mice The 312 group 3 innate lymphoid cell defect in aryl hydrocarbon receptor deficient mice is 313 associated with T cell hyperactivation during intestinal infection, RORgammat and 295 commensal microflora are required for the differentiation of mucosal interleukin 22- 296 producing NKp46+ cells, pp.83-91122, 2009.

B. Lo, M. Gold, M. Hughes, F. Antignano, Y. Valdez et al., The orphan 319 nuclear receptor ROR alpha and group 3 innate lymphoid cells drive fibrosis in a mouse 320 model of Crohn's disease Innate 322 production of T(H)2 cytokines by adipose tissue-associated c-Kit(+)Sca-1(+) lymphoid 323 cells 325 Identification of an interleukin (IL)-25-dependent cell population that provides IL-4, IL- 326 5, and IL-13 at the onset of helminth expulsion 328 Mast cells are crucial for induction of group 2 innate lymphoid cells and clearance of 329 helminth infections, Interferon-lambda and interleukin 22 act synergistically for the induction of interferon- 317 stimulated genes and control of rotavirus infection Differences in the 331 Importance of Mast Cells, Basophils, IgE, and IgG versus That of CD4(+) T Cells and 332 ILC2 Cells in Primary and Secondary Immunity to Strongyloides venezuelensis. Infect 333, pp.698-707, 2006.

Y. Wang, S. Spencer, C. Wilhelm, Q. Yang, J. Hall et al., Adaptation of 339 innate lymphoid cells to a micronutrient deficiency promotes type 2 barrier immunity Group 2 innate 342 lymphoid cell proportions are diminished in young helminth infected children and 343 restored by curative anti-helminthic treatment IL-25-responsive, lineage- 345 negative KLRG1(hi) cells are multipotential 'inflammatory' type 2 innate lymphoid 346 cells Tuft cells, 348 taste-chemosensory cells, orchestrate parasite type 2 immunity in the gut Intestinal 351 epithelial tuft cells initiate type 2 mucosal immunity to helminth parasites Tuft-cell-derived IL-25 regulates an 354 intestinal ILC2-epithelial response circuit The 356 neuropeptide neuromedin U stimulates innate lymphoid cells and type 2 inflammation. 357 359 Neuronal regulation of type 2 innate lymphoid cells via neuromedin U ILC1 confer 362 early host protection at initial sites of viral infection Murine liver- 364 resident group 1 innate lymphoid cells regulate optimal priming of anti-viral CD8+ T 365 cells 367 Fibroblastic reticular cells regulate intestinal inflammation via IL-15-mediated control 368 of group 1 ILCs, ILC2s activated by IL-25 promote antigen-specific Th2 and Th9 functions 336 that contribute to the control of Trichinella spiralis infection M, Kleinschek M et al. 373 RORgt+ innate lymphoid cells regulate intestinal homeostasis by integrating negative 374 signals from the symbiotic microbiota of 376 novel lymphoid tissues in murine intestinal mucosa where clusters of c-kit + IL-7R + 377, pp.338432-338439, 2011.

M. Tsuji, K. Suzuki, H. Kitamura, M. Maruya, K. Kinoshita et al., Requirement 379 for lymphoid tissue-inducer cells in isolated follicle formation and T cell-independent 380 immunoglobulin a generation in the gutCR1(+) mononuclear phagocytes support colitis-associated innate lymphoid cell 383 production of IL-22, Thy1 + lympho-hemopoietic progenitors develop, pp.1449-59261, 1996.

A. Satpathy, C. Briseno, J. Lee, D. Ng, N. Manieri et al., Notch2-dependent 388 classical dendritic cells orchestrate intestinal immunity to attaching-and-effacing 389 bacterial pathogens, Microbiota-dependent crosstalk between macrophages and ILC3 promotes intestinal 386 homeostasis, pp.1249288-387, 2013.

, 392 receptor+ innate lymphoid cells, Immunity, vol.37, pp.674-84, 2012.

K. Atarashi, J. Nishimura, T. Shima, Y. Umesaki, M. Yamamoto et al., ATP 394 drives lamina propria T(H)17 cell differentiation An IL-23R/IL-22 circuit 396 regulates epithelial serum amyloid A to promote local effector Th17 responses Commensal 399 lactobacillus controls immune tolerance during acute liver injury in mice 402 Lymphotoxin controls the IL-22 protection pathway in gut innate lymphoid cells during 403 mucosal pathogen challenge, Marques R et al. Glial- 405 cell-derived neuroregulators control type 3 innate lymphoid cells and gut defence, pp.808-12381, 2008.

Y. Goto, T. Obata, J. Kunisawa, S. Sato, I. Ivanov et al., Th17 cells and cooperatively enhance 409 expression of antimicrobial peptides Innate lymphoid 411 cells regulate intestinal epithelial cell glycosylation 413 Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in 414 sickness, Interleukin J Exp Med Science Nature, vol.2036034551462, pp.2271-2280, 2006.

A. Kruglov, S. Grivennikov, D. Kuprash, C. Winsauer, S. Prepens et al., 419 Nonredundant function of soluble LTalpha3 produced by innate lymphoid cells in 420 intestinal homeostasis Innate 422 lymphoid cells regulate CD4+ T-cell responses to intestinal commensal bacteria Segmented filamentous 425 bacteria antigens presented by intestinal dendritic cells drive mucosal Th17 cell 426 differentiation 428 Conventional CD4+ T cells regulate IL-22-producing intestinal innate lymphoid cells Innate lymphoid cells in inflammation and immunity, Cell Mol Immunol Science Nature Immunity Mucosal Immunol Immunity, vol.4183426449840667674168, issue.427, pp.1243-6113, 2013.

J. Nussbaum, S. Van-dyken, J. Von-moltke, L. Cheng, A. Mohapatra et al., Type 2 innate lymphoid cells control eosinophil homeostasis 439 Group 2 innate lymphoid cells are critical for the initiation of adaptive T helper 2 cell- 440 mediated allergic lung inflammation Importance of both innate immunity and 442 acquired immunity for rapid expulsion of S. venezuelensis Type 2 innate lymphoid cells 444 constitutively express arginase-I in the naive and inflamed lung ILC2s and T 447 cells cooperate to ensure maintenance of M2 macrophages for lung immunity against 448 hookworms Pleural cavity type 2 innate lymphoid cells 450 precede Th2 expansion in murine Litomosoides sigmodontis infection IL-9- 453 mediated survival of type 2 innate lymphoid cells promotes damage control in helminth- 454 induced lung inflammation IL-33 signaling 456 regulates innate and adaptive immunity to Cryptococcus neoformans, Innate lymphoid type 2 cells sustain visceral adipose tissue eosinophils and alternatively 434 activated macrophages T1/ST2 459 promotes T helper 2 cell activation and polyfunctionality in bronchopulmonary 460 mycosis P et al. First-breath- 462 induced type 2 pathways shape the lung immune environment, pp.535-49245, 2013.

D. Califano, Y. Furuya, S. Roberts, A. D. Mckenzie, A. Metzger et al., IFN-gamma 468 increases susceptibility to influenza A infection through suppression of group II innate 469 lymphoid cells Neonatal rhinovirus 471 induces mucous metaplasia and airways hyperresponsiveness through IL-25 and type 2 472 innate lymphoid cells 474 IL-33-dependent type 2 inflammation during rhinovirus-induced asthma exacerbations 475 in vivo The innate cytokines IL-25, 477 IL-33, and TSLP cooperate in the induction of type 2 innate lymphoid cell expansion 478 and mucous metaplasia in rhinovirus-infected immature mice Respiratory Syncytial 481 Virus Disease Is Mediated by Age-Variable IL-33 483 Respiratory syncytial virus infection activates IL-13-producing group 2 innate lymphoid 484 cells through thymic stromal lymphopoietin IL-33 487 promotes the egress of group 2 innate lymphoid cells from the bone marrow The IL-33 490 receptor (ST2) regulates early IL-13 production in fungus-induced allergic airway 491 inflammation Activation of type 3 493 innate lymphoid cells and interleukin 22 secretion in the lungs during Streptococcus 494 pneumoniae infection Intestinal 500 commensal bacteria mediate lung mucosal immunity and promote resistance of 501 newborn mice to infection, Innate lymphoid cells promote lung-tissue homeostasis after infection with influenza 466 virus S et al. Candida albicans 496 airway exposure primes the lung innate immune response against Pseudomonas 497 aeruginosa infection through innate lymphoid cell recruitment and interleukin-22- 498 associated mucosal response, pp.1045-54209, 2011.