S. F. Altschul, T. L. Madden, A. A. Schäffer, J. Zhang, W. Miller et al., Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Research, vol.25, issue.17, pp.3389-3402, 1997.
DOI : 10.1093/nar/25.17.3389

B. Bartolomé, J. Jubete, E. Martinez, F. De, and C. , Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives, Gene, vol.102, issue.1, pp.75-78, 1991.
DOI : 10.1016/0378-1119(91)90541-I

M. M. Bradford, A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Analytical Biochemistry, vol.72, issue.1-2, pp.248-254, 1976.
DOI : 10.1016/0003-2697(76)90527-3

A. T. Brunger, X-plor version 3.1: a system for X-ray crystallography and NMR, 1992.

G. G. Domagk and B. L. Horecker, Pentose fermentation by Lactobacillus plantarum. V. Fermentation of 2-deoxy-D-ribose, J. Biol. Chem, vol.233, pp.283-286, 1958.

A. Ginsburg, A deoxyribokinase from Lactobacillus plantarum, J. Biol. Chem, vol.234, pp.481-487, 1958.

P. A. Hoffee, 2-Deoxyribose gene-enzyme complex in Salmonella typhimurium . I. Isolation and enzymatic characterization of 2-deoxyribose-nega- tive mutants, J. Bacteriol, vol.95, pp.449-457, 1968.

M. D. Island, B. Y. Wei, and R. J. Kadner, Structure and function of the uhp genes for the sugar phosphate transport system in Escherichia coli and Salmonella typhimurium., Journal of Bacteriology, vol.174, issue.9, pp.2754-2762, 1992.
DOI : 10.1128/jb.174.9.2754-2762.1992

T. A. Jones, J. Y. Zou, S. W. Cowan, and M. Kjeildgaard, Improved methods for building protein models in electron density maps and the location of errors in these models, Acta Crystallographica Section A Foundations of Crystallography, vol.47, issue.2, pp.110-119, 1991.
DOI : 10.1107/S0108767390010224

P. J. Kraulis, MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures, Journal of Applied Crystallography, vol.24, issue.5, pp.946-950, 1991.
DOI : 10.1107/S0021889891004399

U. K. Laemmli, Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4, Nature, vol.244, issue.5259, pp.680-685, 1970.
DOI : 10.1038/227680a0

H. Munier, A. Gilles, P. Glaser, E. Krin, A. Danchin et al., Isolation and characterization of catalytic and calmodulin-binding domains of Bordetella pertussis adenylate cyclase, European Journal of Biochemistry, vol.215, issue.2, pp.469-474, 1991.
DOI : 10.1016/0968-0004(90)90177-D

URL : https://hal.archives-ouvertes.fr/pasteur-00167100

E. A. Raleigh, N. E. Murray, H. Revel, R. M. Blummenthal, D. Westaway et al., strains and implications for gene cloning, Nucleic Acids Research, vol.16, issue.4, pp.1563-1575, 1988.
DOI : 10.1093/nar/16.4.1563

C. Richaud, D. Mengin-lecreulx, S. Pochet, E. J. Johnson, G. N. Cohen et al., Directed evolution of biosynthetic pathways. Recruitment of cysteine thioethers for constructing the cell wall of Escherichia coli, J. Biol. Chem, vol.268, pp.26827-26835, 1993.

B. C. Robertson, P. Jargiello, J. Blank, and P. A. Hoffee, Genetic regulation of ribonucleoside and deoxyribonucleoside catabolism in Salmonella typhimurium, J. Bacteriol, vol.102, pp.628-635, 1970.

J. Sambrook, E. F. Fritsch, and T. Maniatis, Molecular cloning: a laboratory manual, 1989.

F. Sanger, S. Nicklen, and A. R. Coulson, DNA sequencing with chain-terminating inhibitors, Proc. Natl. Acad. Sci. USA, pp.5463-5467, 1977.
DOI : 10.1073/pnas.74.12.5463

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC431765

S. D. Schimmel, P. Hoffee, and B. L. Horecker, Deoxyribokinase from Salmonella typhimurium, Archives of Biochemistry and Biophysics, vol.164, issue.2, pp.560-570, 1974.
DOI : 10.1016/0003-9861(74)90067-8

J. A. Sigrell, A. D. Cameron, T. A. Jones, and S. L. Mowbray, Purification, characterization, and crystallization of Escherichia coli ribokinase, Protein Science, vol.173, issue.11, pp.2474-2476, 1997.
DOI : 10.1002/pro.5560061124

J. A. Sigrell, A. D. Cameron, T. A. Jones, and S. L. Mowbray, Structure of Escherichia coli ribokinase in complex with ribose and dinucleotide determined to 1.8 ?? resolution: insights into a new family of kinase structures, Structure, vol.6, issue.2, pp.183-193, 1998.
DOI : 10.1016/S0969-2126(98)00020-3

F. W. Studier, A. H. Rosenberg, J. J. Dunn, and J. W. Dubendorff, [6] Use of T7 RNA polymerase to direct expression of cloned genes, Methods Enzymol, vol.185, pp.60-89, 1990.
DOI : 10.1016/0076-6879(90)85008-C

J. D. Thompson, D. G. Higgins, and T. J. Gibson, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Research, vol.22, issue.22, pp.4673-4680, 1994.
DOI : 10.1093/nar/22.22.4673