P. D. Cotter, R. P. Ross, and C. Hill, Bacteriocins ??? a viable alternative to antibiotics?, Nature Reviews Microbiology, vol.76, issue.2, pp.95-105, 2013.
DOI : 10.1038/nrmicro2937

A. Criscuolo and S. Gribaldo, BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments, BMC Evolutionary Biology, vol.10, issue.1, p.210, 2010.
DOI : 10.1186/1471-2148-10-210

G. E. Crooks, G. Hon, J. M. Chandonia, and S. E. Brenner, WebLogo: A Sequence Logo Generator, Genome Research, vol.14, issue.6, pp.1188-1190, 2004.
DOI : 10.1101/gr.849004

M. S. Donia and E. W. Schmidt, Linking Chemistry and Genetics in the Growing Cyanobactin Natural Products Family, Chemistry & Biology, vol.18, issue.4, pp.508-519, 2011.
DOI : 10.1016/j.chembiol.2011.01.019

M. S. Donia, B. J. Hathaway, S. Sudek, M. G. Haygood, M. J. Rosovitz et al., Natural combinatorial peptide libraries in cyanobacterial symbionts of marine ascidians, Nature Chemical Biology, vol.172, issue.12, pp.729-735, 2006.
DOI : 10.1021/jo00349a002

M. S. Donia, J. Ravel, and E. W. Schmidt, A global assembly line for cyanobactins, Nature Chemical Biology, vol.74, issue.6, pp.341-343, 2008.
DOI : 10.1038/nchembio.84

K. L. Dunbar, M. , and D. A. , Revealing Nature???s Synthetic Potential Through the Study of Ribosomal Natural Product Biosynthesis, ACS Chemical Biology, vol.8, issue.3, pp.473-487, 2013.
DOI : 10.1021/cb3005325

S. Guindon, J. F. Dufayard, V. Lefort, M. Anisimova, W. Hordijk et al., New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0, Systematic Biology, vol.59, issue.3, pp.307-321, 2010.
DOI : 10.1093/sysbio/syq010

URL : https://hal.archives-ouvertes.fr/lirmm-00511784

W. E. Houssen, J. , and M. , Azole-Based Cyclic Peptides from the Sea Squirt Lissoclinum Patella: Old Scaffolds, New Avenues, ChemBioChem, vol.131, issue.13, pp.1803-1815, 2010.
DOI : 10.1002/cbic.201000230

W. E. Houssen, S. H. Wright, A. P. Kalverda, G. S. Thompson, S. M. Kelly et al., Solution Structure of the Leader Sequence of the Patellamide Precursor Peptide, PatE1-34, ChemBioChem, vol.35, issue.13, pp.1-34, 2010.
DOI : 10.1002/cbic.201000305

W. E. Houssen, J. Koehnke, D. Zollman, J. Vendome, A. Raab et al., PCC 7425 Defines a New Signature for Processing of Patellamides, ChemBioChem, vol.56, issue.18, pp.2683-2689, 2012.
DOI : 10.1002/cbic.201200661

K. Ishida, M. Welker, G. Christiansen, S. Cadel-six, C. Bouchier et al., Plasticity and Evolution of Aeruginosin Biosynthesis in Cyanobacteria, Applied and Environmental Microbiology, vol.75, issue.7, pp.2017-2026, 2009.
DOI : 10.1128/AEM.02258-08

J. Jokela, L. Herfindal, M. Wahlsten, P. Permi, F. Selheim et al., A Novel Cyanobacterial Nostocyclopeptide is a Potent Antitoxin against Microcystins, ChemBioChem, vol.13, issue.11, pp.1594-1599, 2010.
DOI : 10.1002/cbic.201000179

K. Katoh, K. Kuma, H. Toh, and T. Miyata, MAFFT version 5: improvement in accuracy of multiple sequence alignment, Nucleic Acids Research, vol.33, issue.2, pp.511-518, 2005.
DOI : 10.1093/nar/gki198

J. Kotai, Instructions for preparation of modified nutrient solution Z8 for algae, Norwegian Institute for Water Research, 1972.

N. Leikoski, D. P. Fewer, and K. Sivonen, Widespread Occurrence and Lateral Transfer of the Cyanobactin Biosynthesis Gene Cluster in Cyanobacteria, Applied and Environmental Microbiology, vol.75, issue.3, pp.853-857, 2009.
DOI : 10.1128/AEM.02134-08

N. Leikoski, D. P. Fewer, J. Jokela, M. Wahlsten, L. Rouhiainen et al., Highly Diverse Cyanobactins in Strains of the Genus Anabaena, Applied and Environmental Microbiology, vol.76, issue.3, pp.701-709, 2010.
DOI : 10.1128/AEM.01061-09

N. Leikoski, D. P. Fewer, J. Jokela, P. Alakoski, M. Wahlsten et al., Analysis of an Inactive Cyanobactin Biosynthetic Gene Cluster Leads to Discovery of New Natural Products from Strains of the Genus Microcystis, PLoS ONE, vol.7, issue.8, p.43002, 2012.
DOI : 10.1371/journal.pone.0043002.s008

P. F. Long, W. C. Dunlap, C. N. Battershill, J. , and M. , Shotgun Cloning and Heterologous Expression of the Patellamide Gene Cluster as a Strategy to Achieving Sustained Metabolite Production, ChemBioChem, vol.99, issue.10, pp.1760-1765, 2005.
DOI : 10.1002/cbic.200500210

H. Luesch, W. Y. Yoshida, R. E. Moore, P. , and V. J. , Isolation and structure of the cytotoxin lyngbyabellin B and absolute configuration of lyngbyapeptin A from the marine cyanobacterium Lyngbya majuscula, 2000.

J. A. Mcintosh and E. W. Schmidt, Marine Molecular Machines: Heterocyclization in Cyanobactin Biosynthesis, ChemBioChem, vol.6, issue.10, pp.1413-1421, 2010.
DOI : 10.1002/cbic.201000196

J. A. Mcintosh, M. S. Donia, and E. W. Schmidt, Ribosomal peptide natural products: bridging the ribosomal and nonribosomal worlds, Natural Product Reports, vol.303, issue.Pt 1, pp.537-559, 2009.
DOI : 10.1039/b714132g

J. A. Mcintosh, M. S. Donia, and E. W. Schmidt, Insights into Heterocyclization from Two Highly Similar Enzymes, Journal of the American Chemical Society, vol.132, issue.12, pp.4089-4091, 2010.
DOI : 10.1021/ja9107116

J. A. Mcintosh, M. S. Donia, S. K. Nair, and E. W. Schmidt, Enzymatic Basis of Ribosomal Peptide Prenylation in Cyanobacteria, Journal of the American Chemical Society, vol.133, issue.34, pp.13698-13705, 2011.
DOI : 10.1021/ja205458h

. Aestuaramides, natural library of cyanobactin cyclic peptides resulting from isoprene-derived Claisen rearrangements, ACS Chem. Biol, vol.8, pp.877-883

A. Nagatsu, H. Kajitani, and J. Sakakibara, Muscoride A: A new oxazole peptide alkaloid from freshwater cyanobacterium Nostoc muscorum, Tetrahedron Letters, vol.36, issue.23, 1995.
DOI : 10.1016/0040-4039(95)00724-Q

K. Rutherford, J. Parkhill, J. Crook, T. Horsnell, P. Rice et al., Artemis: sequence visualization and annotation, Bioinformatics, vol.16, issue.10, pp.944-945, 2000.
DOI : 10.1093/bioinformatics/16.10.944

E. W. Schmidt, D. , and M. S. , Life in cellulose houses: symbiotic bacterial biosynthesis of ascidian drugs and drug leads, Current Opinion in Biotechnology, vol.21, issue.6, pp.827-833, 2010.
DOI : 10.1016/j.copbio.2010.10.006

E. W. Schmidt, J. T. Nelson, D. A. Rasko, S. Sudek, J. A. Eisen et al., Patellamide A and C biosynthesis by a microcinlike pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella, Proc. Natl. Acad. Sci. USA, pp.7315-7320, 2005.

P. M. Shih, D. Wu, A. Latifi, S. D. Axen, D. P. Fewer et al., Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing, Proc. Natl. Acad. Sci. USA, pp.1053-1058, 2013.
DOI : 10.1073/pnas.1217107110

URL : https://hal.archives-ouvertes.fr/pasteur-01389305

K. Sivonen, N. Leikoski, D. P. Fewer, and J. Jokela, Cyanobactins???ribosomal cyclic peptides produced by cyanobacteria, Applied Microbiology and Biotechnology, vol.74, issue.5, pp.1213-1225, 2010.
DOI : 10.1007/s00253-010-2482-x

S. Sudek, M. G. Haygood, D. T. Youssef, and E. W. Schmidt, Structure of Trichamide, a Cyclic Peptide from the Bloom-Forming Cyanobacterium Trichodesmium erythraeum, Predicted from the Genome Sequence, Applied and Environmental Microbiology, vol.72, issue.6, pp.4382-4387, 2006.
DOI : 10.1128/AEM.00380-06

J. E. Velá-squez and W. A. Van-der-donk, Genome mining for ribosomally synthesized natural products, Current Opinion in Chemical Biology, vol.15, issue.1, pp.11-21, 2011.
DOI : 10.1016/j.cbpa.2010.10.027

B. Voß, H. Bolhuis, D. P. Fewer, M. Kopf, F. Mö-ke et al., Insights into the Physiology and Ecology of the Brackish-Water-Adapted Cyanobacterium Nodularia spumigena CCY9414 Based on a Genome-Transcriptome Analysis, PLoS ONE, vol.190, issue.3, p.60224, 2013.
DOI : 10.1371/journal.pone.0060224.s005

P. G. Williams, W. Y. Yoshida, R. E. Moore, P. , and V. J. , sp., Journal of Natural Products, vol.65, issue.9, pp.1336-1339, 2002.
DOI : 10.1021/np020184q

URL : https://hal.archives-ouvertes.fr/hal-00119105

M. Wu and J. A. Eisen, A simple, fast, and accurate method of phylogenomic inference, Genome Biology, vol.9, issue.10, p.151, 2008.
DOI : 10.1186/gb-2008-9-10-r151

N. Ziemert, K. Ishida, P. Quillardet, C. Bouchier, C. Hertweck et al., Microcyclamide Biosynthesis in Two Strains of Microcystis aeruginosa: from Structure to Genes and Vice Versa, Applied and Environmental Microbiology, vol.74, issue.6, pp.1791-1797, 2008.
DOI : 10.1128/AEM.02392-07