B. Poiesz, F. Ruscetti, A. Gazdar, P. Bunn, and J. Minna, Detection and isolation of type C retrovirus particles from fresh and cultured lymphocytes of a patient with cutaneous T-cell lymphoma, Proceedings of the National Academy of Sciences, vol.77, issue.12, pp.7415-7419, 1980.
DOI : 10.1073/pnas.77.12.7415

A. Gessain, F. Barin, J. Vernant, O. Gout, and L. Maurs, ANTIBODIES TO HUMAN T-LYMPHOTROPIC VIRUS TYPE-I IN PATIENTS WITH TROPICAL SPASTIC PARAPARESIS, The Lancet, vol.326, issue.8452, pp.407-410, 1985.
DOI : 10.1016/S0140-6736(85)92734-5

A. Gessain and O. Cassar, Epidemiological Aspects and World Distribution of HTLV-1 Infection, Frontiers in Microbiology, vol.3, p.388, 2012.
DOI : 10.3389/fmicb.2012.00388

URL : https://hal.archives-ouvertes.fr/pasteur-01370951

A. Gessain, R. Gallo, and G. Franchini, Low degree of human T-cell leukemia/ lymphoma virus type I genetic drift in vivo as a means of monitoring viral transmission and movement of ancient human populations, J Virol, vol.66, pp.2288-2295, 1992.

J. Slattery, G. Franchini, and A. Gessain, Genomic evolution, patterns of global dissemination, and interspecies transmission of human and simian T-cell leukemia/lymphotropic viruses, Genome Res, vol.9, pp.525-540, 1999.

R. Mahieux, F. Ibrahim, P. Mauclere, V. Herve, and P. Michel, Molecular epidemiology of 58 new African human T-cell leukemia virus type 1, 1997.

M. Salemi, S. Van-dooren, E. Audenaert, E. Delaporte, and P. Goubau, Two New Human T-Lymphotropic Virus Type I Phylogenetic Subtypes in Seroindeterminates, a Mbuti Pygmy and a Gabonese, Have Closest Relatives among African STLV-I Strains, Virology, vol.246, issue.2, pp.277-287, 1998.
DOI : 10.1006/viro.1998.9215

N. Wolfe, W. Heneine, J. Carr, A. Garcia, and V. Shanmugam, Emergence of unique primate T-lymphotropic viruses among central African bushmeat hunters, Proceedings of the National Academy of Sciences, vol.102, issue.22, pp.7994-7999, 2005.
DOI : 10.1073/pnas.0501734102

O. Cassar, C. Capuano, S. Bassot, F. Charavay, and R. Duprez, Human T Lymphotropic Virus Type 1 Subtype C Melanesian Genetic Variants of the Vanuatu Archipelago and Solomon Islands Share a Common Ancestor, The Journal of Infectious Diseases, vol.196, issue.4, pp.510-521, 2007.
DOI : 10.1086/519167

URL : https://hal.archives-ouvertes.fr/pasteur-00531356

R. Yanagihara, Geographic-Specific Genotypes or Topotypes of Human T-Cell Lymphotropic Virus Type I As Markers for Early and Recent Migrations of Human Populations, Adv Virus Res, vol.43, pp.147-186, 1994.
DOI : 10.1016/S0065-3527(08)60048-2

R. Yanagihara, R. Garruto, M. Miller, M. Leon-monzon, and P. Liberski, Isolation of HTLV-I from members of a remote tribe in New Guinea, N Engl J Med, vol.323, pp.993-994, 1990.

R. Yanagihara, V. Nerurkar, R. Garruto, M. Miller, and M. Leon-monzon, Characterization of a variant of human T-lymphotropic virus type I isolated from a healthy member of a remote, recently contacted group in Papua New Guinea., Proceedings of the National Academy of Sciences, vol.88, issue.4, pp.1446-1450, 1991.
DOI : 10.1073/pnas.88.4.1446

A. Gessain, R. Yanagihara, G. Franchini, R. Garruto, and C. Jenkins, Highly divergent molecular variants of human T-lymphotropic virus type I from isolated populations in Papua New Guinea and the Solomon Islands., Proceedings of the National Academy of Sciences, vol.88, issue.17, pp.7694-7698, 1991.
DOI : 10.1073/pnas.88.17.7694

R. Yanagihara, A. Ajdukiewicz, R. Garruto, E. Sharlow, and X. Wu, Human T-lymphotropic virus type I infection in the Solomon Islands, 1991.

I. Bastian, J. Gardner, D. Webb, and I. Gardner, Isolation of a human Tlymphotropic virus type I strain from Australian aboriginals, J Virol, vol.67, pp.843-851, 1993.

I. Bastian, Y. Hinuma, and R. Doherty, HTLV-I among Northern Territory aborigines, Med J Aust, vol.159, pp.12-16, 1993.

O. Cassar, C. Capuano, L. Meertens, E. Chungue, and A. Gessain, Human T-cell Leukemia Virus Type 1 Molecular Variants, Vanuatu, Melanesia, Emerging Infectious Diseases, vol.11, issue.5, pp.706-710, 2005.
DOI : 10.3201/eid1105.041015

A. Gessain, E. Boeri, R. Yanagihara, R. Gallo, and G. Franchini, Complete nucleotide sequence of a highly divergent human T-cell leukemia (lymphotropic) virus type I (HTLV-I) variant from melanesia: genetic and phylogenetic relationship to HTLV-I strains from other geographical regions, J Virol, vol.67, pp.1015-1023, 1993.

L. Einsiedel, K. Verdonck, and E. Gotuzzo, Human T-Lymphotropic Virus 1: Clinical Aspects of a Neglected Infection among Indigenous Populations, Emerging Infections 9, pp.109-127, 2010.
DOI : 10.1128/9781555816803.ch6

L. Einsiedel and R. Woodman, Two nations: racial disparities in bloodstream infections recorded at Alice Springs Hospital, 2001.

M. Kirkland, J. Frasca, and I. Bastian, Adult T-cell leukaemia lymphoma in an Aborigine, Australian and New Zealand Journal of Medicine, vol.3, issue.5, pp.739-741, 1991.
DOI : 10.1111/j.1445-5994.1991.tb01380.x

L. Einsiedel, L. Fernandes, T. Spelman, D. Steinfort, and E. Gotuzzo, Bronchiectasis Is Associated With Human T-Lymphotropic Virus 1 Infection in an Indigenous Australian Population, Clinical Infectious Diseases, vol.54, issue.1, pp.43-50, 2012.
DOI : 10.1093/cid/cir766

L. Mollison, S. Lo, and G. Marning, HTLV-I and scabies in Australian Aborigines, The Lancet, vol.341, issue.8855, pp.1281-1282, 1993.
DOI : 10.1016/0140-6736(93)91186-P

J. May, G. Stent, and R. Schnagl, Antibody to human T-cell lymphotropic virus type I in Australian aborigines, Med J Aust, vol.149, p.104, 1988.

L. Einsiedel, O. Cassar, L. Gordon, and A. Gessain, Human T-Lymphotropic Virus type 1 infective dermatitis in central Australia, Journal of Clinical Virology, vol.57, issue.4, pp.370-373, 2013.
DOI : 10.1016/j.jcv.2013.04.022

URL : https://hal.archives-ouvertes.fr/pasteur-01370949

R. Mahieux, P. Horal, P. Mauclere, O. Mercereau-puijalon, and M. Guillotte, Human T-cell lymphotropic virus type 1 gag indeterminate western blot patterns in Central Africa: relationship to Plasmodium falciparum infection, 2000.

L. Meertens, J. Rigoulet, P. Mauclere, M. Van-beveren, and G. Chen, Molecular and Phylogenetic Analyses of 16 Novel Simian T Cell Leukemia Virus Type 1 from Africa: Close Relationship of STLV-1 from Allenopithecus nigroviridis to HTLV-1 Subtype B Strains, Virology, vol.287, issue.2, pp.275-285, 2001.
DOI : 10.1006/viro.2001.1018

X. Xia and Z. Xie, DAMBE: Software Package for Data Analysis in Molecular Biology and Evolution, Journal of Heredity, vol.92, issue.4, pp.371-373, 2001.
DOI : 10.1093/jhered/92.4.371

K. Strimmer and A. Von-haeseler, Quartet Puzzling: A Quartet Maximum-Likelihood Method for Reconstructing Tree Topologies, Molecular Biology and Evolution, vol.13, issue.7, pp.964-969, 1996.
DOI : 10.1093/oxfordjournals.molbev.a025664

P. Lemey, O. Pybus, S. Van-dooren, and A. Vandamme, A Bayesian statistical analysis of human T-cell lymphotropic virus evolutionary rates, Infection, Genetics and Evolution, vol.5, issue.3, pp.291-298, 2005.
DOI : 10.1016/j.meegid.2004.04.005

V. Nerurkar, K. Song, I. Bastian, B. Garin, and G. Franchini, Genotyping Of Human T Cell Lymphotropic Virus Type I Using Australomelanesian Topotype-Specific Oligonucleotide Primer-Based Polymerase Chain Reaction: Insights Into Viral Evolution And Dissemination, Journal of Infectious Diseases, vol.170, issue.6, pp.1353-1360, 1994.
DOI : 10.1093/infdis/170.6.1353

N. Saksena, M. Sherman, R. Yanagihara, D. Dube, and B. Poiesz, LTR sequence and phylogenetic analyses of a newly discovered variant of HTLV-I isolated from the Hagahai of Papua New Guinea, Virology, vol.189, issue.1, pp.1-9, 1992.
DOI : 10.1016/0042-6822(92)90675-F

S. Van-dooren, M. Salemi, and A. Vandamme, Dating the Origin of the African Human T-Cell Lymphotropic Virus Type-I (HTLV-I) Subtypes, Molecular Biology and Evolution, vol.18, issue.4, pp.661-671, 2001.
DOI : 10.1093/oxfordjournals.molbev.a003846

M. Salemi, J. Desmyter, and A. Vandamme, Tempo and Mode of Human and Simian T-Lymphotropic Virus (HTLV/STLV) Evolution Revealed by Analyses of Full-Genome Sequences, Molecular Biology and Evolution, vol.17, issue.3, pp.374-386, 2000.
DOI : 10.1093/oxfordjournals.molbev.a026317

A. Vandamme, M. Salemi, and J. Desmyter, The simian origins of the pathogenic human T-cell lymphotropic virus type I, Trends in Microbiology, vol.6, issue.12, pp.477-483, 1998.
DOI : 10.1016/S0966-842X(98)01406-1

E. Nerrienet, L. Meertens, A. Kfutwah, Y. Foupouapouognigni, and A. Gessain, Molecular epidemiology of simian T-lymphotropic virus (STLV) in wild-caught monkeys and apes from Cameroon: a new STLV-1, related to human T-lymphotropic virus subtype F, in a Cercocebus agilis, Journal of General Virology, vol.82, issue.12, pp.2973-2977, 2001.
DOI : 10.1099/0022-1317-82-12-2973

S. Locatelli and M. Peeters, Cross-species transmission of simian retroviruses, AIDS, vol.26, issue.6, pp.659-673, 2012.
DOI : 10.1097/QAD.0b013e328350fb68

A. Voevodin, E. Samilchuk, A. J. , R. J. Broussard, and S. , Simian T-Lymphotropic Virus Type 1 (STLV-1) Infection in Wild Yellow Baboons (Papio hamadryas cynocephalus) from Mikumi National Park, Tanzania, Virology, vol.228, issue.2, pp.350-359, 1997.
DOI : 10.1006/viro.1996.8408

R. Mahieux, C. Chappey, M. Georges-courbot, G. Dubreuil, and P. Mauclere, Simian T-cell lymphotropic virus type 1 from Mandrillus sphinx as a simian counterpart of human T-cell lymphotropic virus type 1 subtype D, J Virol, vol.72, pp.10316-10322, 1998.

I. Koralnik, E. Boeri, W. Saxinger, A. Monico, and J. Fullen, Phylogenetic associations of human and simian T-cell leukemia/lymphotropic virus type I strains: evidence for interspecies transmission, J Virol, vol.68, pp.2693-2707, 1994.

S. Calvignac-spencer, E. Adjogoua, C. Akoua-koffi, C. Hedemann, and G. Schubert, Origin of Human T-Lymphotropic Virus Type 1 in Rural C??te d???Ivoire, Emerging Infectious Diseases, vol.18, issue.5, pp.830-833, 2012.
DOI : 10.3201/eid1805.111663

S. Ahuka-mundeke, P. Mbala-kingebeni, F. Liegeois, A. Ayouba, and O. Lunguya-metila, Identification and Molecular Characterization of New Simian T Cell Lymphotropic Viruses in Nonhuman Primates Bushmeat from the Democratic Republic of Congo, AIDS Research and Human Retroviruses, vol.28, issue.6, pp.628-635, 2012.
DOI : 10.1089/aid.2011.0211

F. Ibrahim, G. De-the, and A. Gessain, Isolation and characterization of a new simian T-cell leukemia virus type 1 from naturally infected celebes macaques (Macaca tonkeana): complete nucleotide sequence and phylogenetic relationship with the Australo-Melanesian human T-cell leukemia virus type 1, J Virol, vol.69, pp.6980-6993, 1995.

J. Fleagle, Primate adaptation and Evolution, 1999.

V. Nerurkar, K. Song, R. Melland, and R. Yanagihara, Genetic and phylogenetic analyses of human T-cell lymphotropic virus type I variants from Melanesians with an without spastic myelopathy, Molecular Neurobiology, vol.324, issue.2-3, pp.155-173, 1994.
DOI : 10.1007/BF02780667

J. Friendlander, F. Gentz, K. Green, and D. Merriwether, A Cautionary Tale on Ancient Migration Detection: Mitochondrial DNA Variation in Santa Cruz Islands, Solomon Islands, Human Biology, vol.74, issue.3, pp.453-471, 2002.
DOI : 10.1353/hub.2002.0029

J. Friedlaender, T. Schurr, F. Gentz, G. Koki, and F. Friedlaender, Expanding Southwest Pacific Mitochondrial Haplogroups P and Q, Molecular Biology and Evolution, vol.22, issue.6, pp.1506-1517, 2005.
DOI : 10.1093/molbev/msi142

O. Connor, S. Chappell, and J. , Colonisation and coastal subsistence in Australia and Papua New Guinea: different timing, different modes ? In: Sand C, editor. Les cahiers de l'Archéologie en Nouvelle-Calédonie archaeology: assessments and anniversary of the first Lapita excavation, pp.17-32, 1952.

P. Bellwood, Man's Conquest of the Pacific, 1978.

O. Connell, J. , and A. J. , Dating the colonization of Sahul (Pleistocene Australia???New Guinea): a review of recent research, Journal of Archaeological Science, vol.31, issue.6, pp.835-853, 2004.
DOI : 10.1016/j.jas.2003.11.005

M. Rasmussen, X. Guo, Y. Wang, K. Lohmueller, and S. Rasmussen, An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia, Science, vol.334, issue.6052, pp.94-98, 2011.
DOI : 10.1126/science.1211177

URL : https://hal.archives-ouvertes.fr/hal-00967672

B. Gandevia, The prevalence of signs of chronic respiratory disease in Pintubi and Walbiri Aborigines at Papunya, Central Australia, and Warburton, Western Australia, Med J Aust, vol.2, pp.237-242, 1967.