The geographic mosaic of coevolution, 2005. ,
The co-evolutionary genetics of ecological communities, Nature Reviews Genetics, vol.10, issue.3, pp.185-195, 2007. ,
DOI : 10.1038/nrg2031
Coevolutionary interactions between host and parasite genotypes, Trends in Parasitology, vol.22, issue.1, pp.12-16, 2006. ,
DOI : 10.1016/j.pt.2005.11.008
INTERGENOMIC EPISTASIS AND COEVOLUTIONARY CONSTRAINT IN PLANTS AND RHIZOBIA, Evolution, vol.137, pp.1446-1458, 2009. ,
DOI : 10.1111/j.1558-5646.2009.00913.x
Dissecting the Genetic Architecture of Host???Pathogen Specificity, PLoS Pathogens, vol.11, issue.8, p.1001019, 2010. ,
DOI : 10.1371/journal.ppat.1001019
On the evolutionary ecology of specific immune defence, Trends in Ecology & Evolution, vol.18, issue.1, pp.27-32, 2003. ,
DOI : 10.1016/S0169-5347(02)00013-7
GENETIC VARIATION IN A HOST-PARASITE ASSOCIATION: POTENTIAL FOR COEVOLUTION AND FREQUENCY-DEPENDENT SELECTION, Evolution, vol.19, issue.6, pp.1136-1145, 2001. ,
DOI : 10.2307/2411336
HOST-PARASITE GENETIC INTERACTIONS AND VIRULENCE-TRANSMISSION RELATIONSHIPS IN NATURAL POPULATIONS OF MONARCH BUTTERFLIES, Evolution, vol.41, issue.2, pp.502-514, 2009. ,
DOI : 10.1111/j.1558-5646.2009.00845.x
Genetic specificity and potential for local adaptation between dengue viruses and mosquito vectors, BMC Evolutionary Biology, vol.9, issue.1, p.160, 2009. ,
DOI : 10.1186/1471-2148-9-160
Cloning of the unculturable parasite Pasteuria ramosa and its Daphnia host reveals extreme genotype-genotype interactions, Ecology Letters, vol.85, issue.2, pp.125-131, 2011. ,
DOI : 10.1111/j.1461-0248.2010.01561.x
URL : https://hal.archives-ouvertes.fr/hal-00698035
Diversity and specificity in the interaction between Caenorhabditis elegans and the pathogen Serratia marcescens, BMC Evolutionary Biology, vol.4, issue.1, p.49, 2004. ,
DOI : 10.1186/1471-2148-4-49
URL : https://hal.archives-ouvertes.fr/inserm-00096153
Selection and Strain Specificity of Compatibility between Snail Intermediate Hosts and Their Parasitic Schistosomes, Evolution, vol.52, issue.6, pp.1627-1634, 1998. ,
DOI : 10.2307/2411336
Invertebrate immunity and the limits of mechanistic immunology, Nature Immunology, vol.104, issue.7, pp.651-654, 2005. ,
DOI : 10.1126/science.1091789
Natural insect host-parasite systems show immune priming and specificity: puzzles to be solved, BioEssays, vol.14, issue.4, pp.1026-1034, 2005. ,
DOI : 10.1002/bies.20282
Adaptive immunity in invertebrates: A straw house without a mechanistic foundation, BioEssays, vol.90, issue.11, pp.1138-1146, 2007. ,
DOI : 10.1002/bies.20650
Gut microbiota instead of host genotype drive the specificity in the interaction of a natural host-parasite system, Ecology Letters, vol.16, issue.10, pp.1095-1103, 2012. ,
DOI : 10.1111/j.1461-0248.2012.01831.x
The genetic architecture of susceptibility to parasites, BMC Evolutionary Biology, vol.8, issue.1, p.187, 2008. ,
DOI : 10.1186/1471-2148-8-187
Dengue, New England Journal of Medicine, vol.366, issue.15, pp.1423-1432, 2012. ,
DOI : 10.1056/NEJMra1110265
URL : https://hal.archives-ouvertes.fr/pasteur-01176423
Dynamics of Flavivirus Infection in Mosquitoes, Adv Virus Res, vol.60, pp.187-232, 2003. ,
DOI : 10.1016/S0065-3527(03)60006-0
Variation in vector competence for dengue 2 virus among 24 collections of Aedes aegypti from Mexico and the United States, Am J Trop Med Hyg, vol.67, pp.85-92, 2002. ,
Variation in susceptibility to oral infection with dengue viruses among geographic strains of Aedes aegypti, Am J Trop Med Hyg, vol.28, pp.1045-1052, 1979. ,
Genetic selection of a flavivirus-refractory strain of the yellow fever mosquito Aedes aegypti, Am J Trop Med Hyg, vol.45, pp.399-407, 1991. ,
Quantitative Trait Loci That Control Dengue-2 Virus Dissemination in the Mosquito Aedes aegypti, Genetics, vol.170, issue.1, pp.185-194, 2005. ,
DOI : 10.1534/genetics.104.035634
Quantitative trait loci that control vector competence for dengue-2 virus in the mosquito Aedes aegypti, Genetics, vol.156, pp.687-698, 2000. ,
Quantitative trait loci affecting dengue midgut infection barriers in an advanced intercross line of Aedes aegypti, Insect Molecular Biology, vol.74, issue.6, pp.637-648, 2004. ,
DOI : 10.1111/j.0962-1075.2004.00522.x
The origin, emergence and evolutionary genetics of dengue virus, Infection, Genetics and Evolution, vol.3, issue.1, pp.19-28, 2003. ,
DOI : 10.1016/S1567-1348(03)00004-2
Quantitative genetics of Aedes aegypti vector competence for dengue viruses: towards a new paradigm?, Trends in Parasitology, vol.27, issue.3, pp.111-114, 2011. ,
DOI : 10.1016/j.pt.2010.12.001
Genetic Loci Affecting Resistance to Human Malaria Parasites in a West African Mosquito Vector Population, Science, vol.298, issue.5591, pp.213-216, 2002. ,
DOI : 10.1126/science.1073420
Natural Malaria Infection in Anopheles gambiae Is Regulated by a Single Genomic Control Region, Science, vol.312, issue.5773, pp.577-579, 2006. ,
DOI : 10.1126/science.1124153
INVITED REVIEW: Quantitative trait locus mapping in natural populations: progress, caveats and future directions, Molecular Ecology, vol.14, issue.2, pp.363-379, 2005. ,
DOI : 10.1111/j.1365-294X.2004.02378.x
Flavivirus Susceptibility in Aedes aegypti, Archives of Medical Research, vol.33, issue.4, pp.379-388, 2002. ,
DOI : 10.1016/S0188-4409(02)00373-9
Dengue-1 Virus Clade Replacement in Thailand Associated with Enhanced Mosquito Transmission, Journal of Virology, vol.86, issue.3, pp.1853-1861, 2012. ,
DOI : 10.1128/JVI.06458-11
URL : https://hal.archives-ouvertes.fr/pasteur-00661378
Epistasis dominates the genetic architecture of Drosophila quantitative traits, Proceedings of the National Academy of Sciences, vol.109, issue.39, pp.15553-15559, 2012. ,
DOI : 10.1073/pnas.1213423109
Epistasis ??? the essential role of gene interactions in the structure and evolution of genetic systems, Nature Reviews Genetics, vol.1, issue.11, pp.855-867, 2008. ,
DOI : 10.1038/nrg2452
Dengue Virus Type 2 Infections of Aedes aegypti Are Modulated by the Mosquito's RNA Interference Pathway, PLoS Pathogens, vol.35, issue.2, p.1000299, 2009. ,
DOI : 10.1371/journal.ppat.1000299.t001
An evolutionary conserved function of the JAK-STAT pathway in anti-dengue defense, Proceedings of the National Academy of Sciences, vol.106, issue.42, pp.17841-17846, 2009. ,
DOI : 10.1073/pnas.0905006106
The Aedes aegypti Toll Pathway Controls Dengue Virus Infection, PLoS Pathogens, vol.19, issue.7, p.1000098, 2008. ,
DOI : 10.1371/journal.ppat.1000098.s008
Specificity of resistance to dengue virus isolates is associated with genotypes of the mosquito antiviral gene Dicer-2, Proceedings of the Royal Society B: Biological Sciences, vol.20, issue.21, p.20122437, 2013. ,
DOI : 10.1101/gad.1482006
URL : https://hal.archives-ouvertes.fr/pasteur-00759920
Fine Scale Spatiotemporal Clustering of Dengue Virus Transmission in Children and Aedes aegypti in Rural Thai Villages, PLoS Neglected Tropical Diseases, vol.438, issue.7, p.1730, 2012. ,
DOI : 10.1371/journal.pntd.0001730.s001
Mode of transmission and the evolution of arbovirus virulence in mosquito vectors, Proceedings of the Royal Society B: Biological Sciences, vol.47, issue.5, pp.1369-1378, 2009. ,
DOI : 10.1111/j.1420-9101.2005.00920.x
Molecular evolution of the insect-specific flaviviruses, Journal of General Virology, vol.93, issue.2, pp.223-234, 2012. ,
DOI : 10.1099/vir.0.036525-0
Engineering RNA interference-based resistance to dengue virus type 2 in genetically modified Aedes aegypti, Proceedings of the National Academy of Sciences, vol.103, issue.11, pp.4198-4203, 2006. ,
DOI : 10.1073/pnas.0600479103
Opinion: Epistasis: too often neglected in complex trait studies?, Nature Reviews Genetics, vol.138, issue.8, pp.618-625, 2004. ,
DOI : 10.1089/10665270260518272
The Ubiquitous Nature of Epistasis in Determining Susceptibility to Common Human Diseases, Human Heredity, vol.56, issue.1-3, pp.73-82, 2003. ,
DOI : 10.1159/000073735
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors, Proceedings of the National Academy of Sciences, vol.107, issue.44, pp.18933-18938, 2010. ,
DOI : 10.1073/pnas.1007028107
Defining the core Arabidopsis thaliana root microbiome, Nature, vol.35, issue.7409, pp.86-90, 2012. ,
DOI : 10.1038/nature11237
Spatial and Temporal Circulation of Dengue Virus Serotypes: A Prospective Study of Primary School Children in Kamphaeng Phet, Thailand, American Journal of Epidemiology, vol.156, issue.1, pp.52-59, 2002. ,
DOI : 10.1093/aje/kwf006
Mosquitoes: Female Monogamy Induced by Male Accessory Gland Substance, Science, vol.156, issue.3781, pp.1499-1501, 1967. ,
DOI : 10.1126/science.156.3781.1499
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods, Molecular Biology and Evolution, vol.28, issue.10, pp.2731-2739, 2011. ,
DOI : 10.1093/molbev/msr121
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203626
Dengue Plaque Reduction Neutralization Test (PRNT) in Primary and Secondary Dengue Virus Infections: How Alterations in Assay Conditions Impact Performance, American Journal of Tropical Medicine and Hygiene, vol.81, issue.5, pp.825-833, 2009. ,
DOI : 10.4269/ajtmh.2009.08-0625
Microsatellite Isolation and Linkage Group Identification in the Yellow Fever Mosquito Aedes aegypti, Journal of Heredity, vol.98, issue.3, pp.202-210, 2007. ,
DOI : 10.1093/jhered/esm015
Genome-based polymorphic microsatellite development and validation in the mosquito Aedes aegypti and application to population genetics in Haiti, BMC Genomics, vol.10, issue.1, p.590, 2009. ,
DOI : 10.1186/1471-2164-10-590
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector, Science, vol.316, issue.5832, pp.1718-1723, 2007. ,
DOI : 10.1126/science.1138878
URL : https://hal.archives-ouvertes.fr/hal-00156214
Linkage map organization of expressed sequence tags and sequence tagged sites in the mosquito, Aedes aegypti, Insect Molecular Biology, vol.85, issue.4, pp.371-378, 2002. ,
DOI : 10.1017/S0016672399003791
Tandem repeats finder: a program to analyze DNA sequences, Nucleic Acids Research, vol.27, issue.2, pp.573-580, 1999. ,
DOI : 10.1093/nar/27.2.573
Primer3 on the WWW for general users and for biologist programmers Bioinformatics methods and protocols: methods in molecular biology, pp.365-386, 2000. ,
Chapter 6: Generalized linear models, Statistical models in S, 1991. ,
R: A language and environment for statistical computing. R Foundation for Statistical Computing, 2012. ,