Comparison of the Differential Context-dependence of DNA Deamination by APOBEC Enzymes: Correlation with Mutation Spectra in Vivo, Journal of Molecular Biology, vol.337, issue.3, pp.585-596, 2004. ,
DOI : 10.1016/j.jmb.2004.01.046
Cytidine Deamination of Retroviral DNA by Diverse APOBEC Proteins, Current Biology, vol.14, issue.15, pp.1392-1396, 2004. ,
DOI : 10.1016/j.cub.2004.06.057
The Vif Protein of HIV Triggers Degradation of the Human Antiretroviral DNA Deaminase APOBEC3G, Current Biology, vol.13, issue.22, pp.2009-2013, 2003. ,
DOI : 10.1016/j.cub.2003.10.034
Hypermutation of HIV-1 DNA in the Absence of the Vif Protein, Science, vol.300, issue.5622, p.1112, 2003. ,
DOI : 10.1126/science.1083338
Retroviral restriction by APOBEC proteins, Nature Reviews Immunology, vol.92, issue.11, pp.868-877, 2004. ,
DOI : 10.1046/j.1523-1747.1999.00682.x
Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts, Nature, vol.424, issue.6944, pp.99-103, 2003. ,
DOI : 10.1038/nature01709
Species-Specific Exclusion of APOBEC3G from HIV-1 Virions by Vif, Cell, vol.114, issue.1, pp.21-31, 2003. ,
DOI : 10.1016/S0092-8674(03)00515-4
APOBEC3G is a single-stranded DNA cytidine deaminase and functions independently of HIV reverse transcriptase, Nucleic Acids Research, vol.32, issue.8, pp.2421-2429, 2004. ,
DOI : 10.1093/nar/gkh554
From The Cover: A single amino acid difference in the host APOBEC3G protein controls the primate species specificity of HIV type 1 virion infectivity factor, Proceedings of the National Academy of Sciences, vol.101, issue.11, pp.3770-3774, 2004. ,
DOI : 10.1073/pnas.0307713101
The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA, Nature, vol.424, issue.6944, pp.94-98, 2003. ,
DOI : 10.1038/nature01707
An Anthropoid-Specific Locus of Orphan C to U RNA-Editing Enzymes on Chromosome 22, Genomics, vol.79, issue.3, pp.285-296, 2002. ,
DOI : 10.1006/geno.2002.6718
Cellular inhibitors of long interspersed element 1 and Alu retrotransposition, Proceedings of the National Academy of Sciences, vol.103, issue.23, pp.8780-8785, 2006. ,
DOI : 10.1073/pnas.0603313103
High-molecular-mass APOBEC3G complexes restrict Alu retrotransposition, Proceedings of the National Academy of Sciences, vol.103, issue.42, pp.15588-15593, 2006. ,
DOI : 10.1073/pnas.0604524103
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1592537
Restriction of Foamy Viruses by APOBEC Cytidine Deaminases, Journal of Virology, vol.80, issue.2, pp.605-614, 2006. ,
DOI : 10.1128/JVI.80.2.605-614.2006
URL : https://hal.archives-ouvertes.fr/hal-00357984
APOBEC3G cytidine deaminase inhibits retrotransposition of endogenous retroviruses, Nature, vol.16, issue.7024, pp.430-433, 2005. ,
DOI : 10.1093/nar/30.11.e49
URL : https://hal.archives-ouvertes.fr/pasteur-01372656
Genetic Editing of HBV DNA by Monodomain Human APOBEC3 Cytidine Deaminases and the Recombinant Nature of APOBEC3G, PLoS ONE, vol.5, issue.1, p.4277, 2009. ,
DOI : 10.1371/journal.pone.0004277.s002
URL : https://hal.archives-ouvertes.fr/pasteur-00363413
Murine APOBEC1 Is a Powerful Mutator of Retroviral and Cellular RNA In Vitro and In Vivo, Journal of Molecular Biology, vol.385, issue.1, pp.65-78, 2009. ,
DOI : 10.1016/j.jmb.2008.10.043
URL : https://hal.archives-ouvertes.fr/pasteur-00363408
Foamy Virus Bet Proteins Function as Novel Inhibitors of the APOBEC3 Family of Innate Antiretroviral Defense Factors, Journal of Virology, vol.79, issue.14, pp.8724-8731, 2005. ,
DOI : 10.1128/JVI.79.14.8724-8731.2005
Extensive editing of a small fraction of human T-cell leukemia virus type 1 genomes by four APOBEC3 cytidine deaminases, Journal of General Virology, vol.86, issue.9, pp.2489-2494, 2005. ,
DOI : 10.1099/vir.0.80973-0
URL : https://hal.archives-ouvertes.fr/pasteur-00013751
Inhibition of Hepatitis B Virus Replication by APOBEC3G, Science, vol.303, issue.5665, p.1829, 2004. ,
DOI : 10.1126/science.1092066
Extensive editing of both hepatitis B virus DNA strands by APOBEC3 cytidine deaminases in vitro and in vivo, Proceedings of the National Academy of Sciences, vol.102, issue.23, pp.8321-8326, 2005. ,
DOI : 10.1073/pnas.0408223102
genes in chronic hepatitis B virus infection, Hepatology Research, vol.199, issue.12, pp.1159-1168, 2009. ,
DOI : 10.1111/j.1872-034X.2009.00566.x
Hepatitis B virus DNA is subject to extensive editing by the human deaminase APOBEC3C, Hepatology, vol.235, issue.3, pp.682-689, 2007. ,
DOI : 10.1002/hep.21733
Human Immunodeficiency Virus Type 1 DNA Sequences Genetically Damaged by Hypermutation Are Often Abundant in Patient Peripheral Blood Mononuclear Cells and May Be Generated during Near-Simultaneous Infection and Activation of CD4+ T Cells, Journal of Virology, vol.75, issue.17, pp.7973-7986, 2001. ,
DOI : 10.1128/JVI.75.17.7973-7986.2001
G???to???A Hypermutation in Hepatitis B Virus (HBV) and Clinical Course of Patients with Chronic HBV Infection, The Journal of Infectious Diseases, vol.199, issue.11, pp.1599-1607, 2009. ,
DOI : 10.1086/598951
G to A hypermutation of TT virus, Virus Research, vol.149, issue.2, pp.211-216, 2010. ,
DOI : 10.1016/j.virusres.2010.01.019
Evidence for Editing of Human Papillomavirus DNA by APOBEC3 in Benign and Precancerous Lesions, Science, vol.320, issue.5873, pp.230-233, 2008. ,
DOI : 10.1126/science.1153201
URL : https://hal.archives-ouvertes.fr/pasteur-00363398
The interferon-induced expression of APOBEC3G in human blood???brain barrier exerts a potent intrinsic immunity to block HIV-1 entry to central nervous system, Virology, vol.367, issue.2, pp.440-451, 2007. ,
DOI : 10.1016/j.virol.2007.06.010
Interferon-inducible expression of APOBEC3 editing enzymes in human hepatocytes and inhibition of hepatitis B virus replication, Hepatology, vol.203, issue.6, pp.1364-1374, 2006. ,
DOI : 10.1002/hep.21187
URL : https://hal.archives-ouvertes.fr/pasteur-00683855
Defining APOBEC3 Expression Patterns in Human Tissues and Hematopoietic Cell Subsets, Journal of Virology, vol.83, issue.18, pp.9474-9485, 2009. ,
DOI : 10.1128/JVI.01089-09
Induction of APOBEC3 family proteins, a defensive maneuver underlying interferon-induced anti???HIV-1 activity, The Journal of Experimental Medicine, vol.13, issue.1, pp.41-46, 2006. ,
DOI : 10.1006/meth.2001.1262
APOBEC3 proteins mediate the clearance of foreign DNA from human cells, Nature Structural & Molecular Biology, vol.8, issue.2, pp.222-229, 2010. ,
DOI : 10.1093/molbev/msi026
Anti-viral protein APOBEC3G is induced by interferon-?? stimulation in human hepatocytes, Biochemical and Biophysical Research Communications, vol.341, issue.2, pp.314-319, 2006. ,
DOI : 10.1016/j.bbrc.2005.12.192
Differences in APOBEC3G Expression in CD4+ T Helper Lymphocyte Subtypes Modulate HIV-1 Infectivity, PLoS Pathogens, vol.74, issue.2, p.1000292, 2009. ,
DOI : 10.1371/journal.ppat.1000292.g005
APOBEC3G upregulation by alpha interferon restricts human immunodeficiency virus type 1 infection in human peripheral plasmacytoid dendritic cells, Journal of General Virology, vol.89, issue.3, pp.722-730, 2008. ,
DOI : 10.1099/vir.0.83530-0
Specific Expression of Activation-induced Cytidine Deaminase (AID), a Novel Member of the RNA-editing Deaminase Family in Germinal Center B Cells, Journal of Biological Chemistry, vol.274, issue.26, pp.18470-18476, 1999. ,
DOI : 10.1074/jbc.274.26.18470
Expression of activation-induced cytidine deaminase in human hepatocytes via NF-??B signaling, Oncogene, vol.296, issue.38, pp.5587-5595, 2007. ,
DOI : 10.1038/sj.onc.1210344
Activation-Induced Cytidine Deaminase Links Between Inflammation and the Development of Colitis-Associated Colorectal Cancers, Gastroenterology, vol.135, issue.3, pp.889-898, 2008. ,
DOI : 10.1053/j.gastro.2008.06.091
Hepatitis C Virus (HCV)-Induced Immunoglobulin Hypermutation Reduces the Affinity and Neutralizing Activities of Antibodies against HCV Envelope Protein, Journal of Virology, vol.82, issue.13, pp.6711-6720, 2008. ,
DOI : 10.1128/JVI.02582-07
Helicobacter pylori infection triggers aberrant expression of activation-induced cytidine deaminase in gastric epithelium, Nature Medicine, vol.290, issue.4, pp.470-476, 2007. ,
DOI : 10.1038/nm1566
Organ-specific profiles of genetic changes in cancers caused by activation-induced cytidine deaminase expression, International Journal of Cancer, vol.31, issue.12, pp.2735-2740, 2008. ,
DOI : 10.1002/ijc.23853
Constitutive Expression of AID Leads to Tumorigenesis, The Journal of Experimental Medicine, vol.194, issue.9, pp.1173-1181, 2003. ,
DOI : 10.1016/S1097-2765(02)00742-6
Apolipoprotein B mRNA-editing protein induces hepatocellular carcinoma and dysplasia in transgenic animals., Proceedings of the National Academy of Sciences, vol.92, issue.18, pp.8483-8487, 1995. ,
DOI : 10.1073/pnas.92.18.8483
A novel mouse model of hepatocarcinogenesis triggered by AID causing deleterious p53 mutations, Oncogene, vol.4, issue.4, pp.469-478, 2009. ,
DOI : 10.1093/nar/gkg595
Inflammation and cancer: how friendly is the relationship for cancer patients?, Current Opinion in Pharmacology, vol.9, issue.4, pp.351-369, 2009. ,
DOI : 10.1016/j.coph.2009.06.020
Cancer-related inflammation, Nature, vol.342, issue.7203, pp.436-444, 2008. ,
DOI : 10.1038/nature07205
???transformed acute lymphoblastic leukemia cells, The Journal of Experimental Medicine, vol.86, issue.5, pp.1157-1166, 2007. ,
DOI : 10.1073/pnas.1031503100
Hepatitis C virus induces a mutator phenotype: Enhanced mutations of immunoglobulin and protooncogenes, Proceedings of the National Academy of Sciences, vol.101, issue.12, pp.4262-4267, 2004. ,
DOI : 10.1073/pnas.0303971101
Human APOBEC1 cytidine deaminase edits HBV DNA, Retrovirology, vol.6, issue.1, p.96, 2009. ,
DOI : 10.1186/1742-4690-6-96
Recovery of APOBEC3-edited human immunodeficiency virus G->A hypermutants by differential DNA denaturation PCR, Journal of General Virology, vol.86, issue.1, pp.125-129, 2005. ,
DOI : 10.1099/vir.0.80426-0
Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation, Nature, vol.424, issue.6944, pp.103-107, 2003. ,
DOI : 10.1038/nature01760
A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil, Proceedings of the National Academy of Sciences, vol.96, issue.16, pp.9045-9050, 1999. ,
DOI : 10.1073/pnas.96.16.9045
Programmed death 1 expression during antiviral treatment of chronic hepatitis B: Impact of hepatitis B e-antigen seroconversion, Hepatology, vol.39, issue.3, pp.759-769, 2008. ,
DOI : 10.1002/hep.22419
Point Mutations Upstream of Hepatitis B Virus Core Gene Affect DNA Replication at the Step of Core Protein Expression, Journal of Virology, vol.80, issue.2, pp.587-595, 2006. ,
DOI : 10.1128/JVI.80.2.587-595.2006
Frequent integration of precore/core mutants of hepatitis B virus in human hepatocellular carcinoma tissues, Journal of Viral Hepatitis, vol.88, issue.2, pp.115-123, 2000. ,
DOI : 10.1053/jhep.1996.v24.pm0008781313
Vaccine-induced escape mutant of hepatitis B virus, The Lancet, vol.336, issue.8711, pp.325-329, 1990. ,
DOI : 10.1016/0140-6736(90)91874-A
Effect of hepatitis B virus mutants on efficacy of vaccination, The Lancet, vol.355, issue.9213, pp.1382-1384, 2000. ,
DOI : 10.1016/S0140-6736(00)02132-2
Altered antigenicity of 'a' determinant variants of hepatitis B virus., Journal of General Virology, vol.78, issue.10, pp.2639-2645, 1997. ,
DOI : 10.1099/0022-1317-78-10-2639
Vaccine- and hepatitis B immune globulin-induced escape mutations of hepatitis B virus surface antigen, Journal of Biomedical Science, vol.343, issue.suppl 2, pp.237-247, 2001. ,
DOI : 10.1007/BF02256597
Mutation of the ''a'' determinant of HBsAg with discordant HBsAg diagnostic kits, Viral Immunol, vol.17, pp.440-444, 2004. ,
Lymphoid neogenesis in chronic inflammatory diseases, Nature Reviews Immunology, vol.68, issue.3, pp.205-217, 2006. ,
DOI : 10.1006/clin.1993.1169
Role of inducible bronchus associated lymphoid tissue (iBALT) in respiratory immunity, Nature Medicine, vol.167, issue.9, pp.927-934, 2004. ,
DOI : 10.1172/JCI200319188
Recruitment and Activation of Naive T Cells in the Islets by Lymphotoxin ?? Receptor-Dependent Tertiary Lymphoid Structure, Immunity, vol.25, issue.3, pp.499-509, 2006. ,
DOI : 10.1016/j.immuni.2006.06.016
Enhanced expression of lymphomagenesis-related genes in peripheral blood B cells of chronic hepatitis C patients, Clinical Immunology, vol.135, issue.3, 2010. ,
DOI : 10.1016/j.clim.2010.02.002
Liver histology in patients with HBsAg negative anti-HBc and anti-HCV positive chronic hepatitis, Journal of Medical Virology, vol.51, issue.2, pp.222-226, 2005. ,
DOI : 10.1002/jmv.20260
Chronic hepatitis in patients with active hepatitis B virus and hepatitis C virus combined infections: a histological study, Am J Gastroenterol, vol.90, pp.955-958, 1995. ,
Suppression of hepatitis B virus enhancer 1 and 2 by hepatitis C virus core protein, Journal of Hepatology, vol.37, issue.6, pp.855-862, 2002. ,
DOI : 10.1016/S0168-8278(02)00296-9
Suppression of hepatitis B virus expression and replication by hepatitis C virus core protein in HuH-7 cells, J Virol, vol.67, pp.5823-5832, 1993. ,
APOBEC3G Genetic Variants and Their Influence on the Progression to AIDS, Journal of Virology, vol.78, issue.20, pp.11070-11076, 2004. ,
DOI : 10.1128/JVI.78.20.11070-11076.2004
Population Stratification of a Common APOBEC Gene Deletion Polymorphism, PLoS Genetics, vol.296, issue.4, p.63, 2007. ,
DOI : 10.1371/journal.pgen.0030063.st007
RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase, Nature, vol.380, pp.454-456, 1996. ,
Replicating hepatitis delta virus RNA is edited in the nucleus by the small form of ADAR1, Proceedings of the National Academy of Sciences, vol.99, issue.23, pp.15118-15123, 2002. ,
DOI : 10.1073/pnas.232416799
Loss of Conserved Cysteine Residues in the Attachment (G) Glycoprotein of Two Human Respiratory Syncytial Virus Escape Mutants That Contain Multiple A-G Substitutions (Hypermutations), Virology, vol.198, issue.2, pp.653-662, 1994. ,
DOI : 10.1006/viro.1994.1077
Antigenic structure of the human respiratory syncytial virus G glycoprotein and relevance of hypermutation events for the generation of antigenic variants., Journal of General Virology, vol.78, issue.10, pp.2419-2429, 1997. ,
DOI : 10.1099/0022-1317-78-10-2419
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes, Genome Biol, vol.3, p.34, 2002. ,