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The crystal structure of Mycobacterium tuberculosis adenylate kinase in complex with two molecules of ADP and Mg2+ supports an associative mechanism for phosphoryl transfer.
Bellinzoni M., Haouz A., Graña M., Munier-Lehmann H., Shepard W., Alzari P. M.
Protein Science 15, 6 (2006) 1489-93 - http://hal-pasteur.archives-ouvertes.fr/pasteur-00166948
(16672241)
The crystal structure of Mycobacterium tuberculosis adenylate kinase in complex with two molecules of ADP and Mg2+ supports an associative mechanism for phosphoryl transfer.
Marco Bellinzoni1, Ahmed Haouz2, Martin Graña1, Hélène Munier-Lehmann3, William Shepard4, Pedro Maria Alzari () 1, 2
1 :  Biochimie Structurale
Institut Pasteur de Paris – CNRS : URA2185
28 Rue du Docteur Roux 75724 Paris Cedex 15
France
2 :  Cristallogenèse et Diffraction des Rayons X (Plate-forme/PF6)
Institut Pasteur de Paris
25-28 rue du Docteur Roux F-75724 Paris Cedex 15
France
3 :  UCO - Chimie Organique
CNRS : URA2128 – Institut Pasteur de Paris
28 rue du Docteur Roux 75724 Paris Cedex 15
France
4 :  SSOLEIL - Synchrotron SOLEIL
http://www.synchrotron-soleil.fr
CNRS : UR1
L'Orme des Merisiers Saint-Aubin - BP 48 91192 GIF-sur-YVETTE CEDEX
France
The crystal structure of Mycobacterium tuberculosis adenylate kinase (MtAK) in complex with two ADP molecules and Mg2+ has been determined at 1.9 A resolution. Comparison with the solution structure of the enzyme, obtained in the absence of substrates, shows significant conformational changes of the LID and NMP-binding domains upon substrate binding. The ternary complex represents the state of the enzyme at the start of the backward reaction (ATP synthesis). The structure is consistent with a direct nucleophilic attack of a terminal oxygen from the acceptor ADP molecule on the beta-phosphate from the donor substrate, and both the geometry and the distribution of positive charge in the active site support the hypothesis of an associative mechanism for phosphoryl transfer.
Anglais
0961-8368

Articles dans des revues avec comité de lecture
10.1110/ps.062163406
Protein Science (Protein Sci)
Publisher Wiley-Blackwell
ISSN 0961-8368 (eISSN : 1469-896X)
internationale
06/2006
15
6
1489-93

Adenosine Diphosphate – Adenosine Triphosphate – Adenylate Kinase – Binding Sites – Catalysis – Crystallography – X-Ray – Magnesium – Models – Molecular – Mycobacterium tuberculosis – Protein Conformation